Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C06
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.34 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 326 GMVHRICFTTCLIFCVITIYYMN 394
           G++  + FT+  IF V++I+YM+
Sbjct: 234 GLILLLMFTSHFIFIVVSIFYMS 256


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +1

Query: 193 LSWFINVHVLCNCCW*PRDNSVW*SIPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLR 372
           L  FI   VLC  C  P          +  T+ STI      C +H P +  H +  F+ 
Sbjct: 3   LDGFIRKFVLCPECENPETEL------LVSTKRSTISQGCKACGYHSPLESNHKLVTFIL 56

Query: 373 DN 378
            N
Sbjct: 57  KN 58


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 163 TVSYDYNIRRLSWFINVHVLCNCCW*PRDNSV----W*SIPIEITRSSTIDG 306
           T S   N  R S F N     N C+ PR+NS+    +   P E  RS+ IDG
Sbjct: 381 TFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSP-ESNRSNEIDG 431


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 166 VSYDYNIRRLSWFINVHVL 222
           + Y  N RR+S F+N+ +L
Sbjct: 113 LGYSINYRRISIFVNLAIL 131


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 268 IPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLRDNHLL 387
           + + IT    I GNI    W+ P++    +P+ +   H+L
Sbjct: 139 LAMTITGPLVIIGNIAMELWNMPRENIEPLPNVILACHML 178


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 389 MNKLSQKKYAVVAPQPAAVKSRRHK 463
           M  ++ KK+  + P P+ +K+ R K
Sbjct: 614 MGYMAAKKHLEINPDPSILKNLRQK 638


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +1

Query: 7   HLGSTQSKSKLAQIPPNQIRQNGGKQCHVLRTVVNXNPF 123
           H  S  SK      PP Q+  N  K+    +  V   PF
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPF 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,407
Number of Sequences: 336
Number of extensions: 2648
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)