Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_C06
         (562 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0275 - 23762905-23762995,23763775-23763841,23763925-237639...    63   1e-10

>05_05_0275 -
           23762905-23762995,23763775-23763841,23763925-23763976,
           23764966-23765124
          Length = 122

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 31/89 (34%), Positives = 52/89 (58%)
 Frame = +2

Query: 137 MQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKLPEVVLSMGISL 316
           ++MY+ +   S +  I GG++ SL+F+F +T +GN +        +     VV++   +L
Sbjct: 23  LEMYRGRFASSELMTIAGGFVSSLLFLFLLTFIGNYQE---ANGVKTGWGAVVVAELTAL 79

Query: 317 IAAGMVHRICFTTCLIFCVITIYYMNKLS 403
           I AG VHR+C TTC +F    +Y ++KLS
Sbjct: 80  IVAGTVHRVCITTCFLFSAGFLYEVDKLS 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,254,093
Number of Sequences: 37544
Number of extensions: 250008
Number of successful extensions: 569
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)