Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B23
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572...    31   0.88 
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804     29   4.7  
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602...    28   8.2  

>04_04_0201 -
           23555336-23556008,23556097-23556258,23556353-23557206,
           23557452-23557613,23558197-23558649,23559729-23559788,
           23559983-23560058,23561546-23561593,23561948-23562022,
           23562067-23562494
          Length = 996

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 23/81 (28%), Positives = 37/81 (45%)
 Frame = +2

Query: 428 TYSLPVNSSAADVTAELTSDGYLVVTAPISENVDKTKNTERVVPIVXTGAPYKKDEPVEK 607
           T S+ V+  AA      + +G + VT+ +S+ VD+      V+P+    A  + DE   K
Sbjct: 659 TASMQVHEGAAAAQLGESPEG-VDVTSAVSDEVDRDDKATHVLPLAAAAADGESDELERK 717

Query: 608 TTVETLDVSTTQEPKTSXPAV 670
                LD   T +  T+  AV
Sbjct: 718 R--RKLDSCATMDMSTASRAV 736


>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
          Length = 1209

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
 Frame = -2

Query: 689 VPVLQSLPLEXMSSAPES*K----RPRFLLSSFLQARPS-CTERQXR 564
           V VLQS+P +  SS+P S K     P F+ SS  ++R S C  ++ R
Sbjct: 256 VVVLQSVPTQQQSSSPSSSKLRADAPEFIPSSIKKSRASRCKAKKKR 302


>03_05_0136 +
           21158917-21159939,21160183-21160241,21160259-21160294,
           21160345-21160387,21160582-21160698,21162090-21162179,
           21162329-21162436,21162547-21162588
          Length = 505

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 628 RFYDSGAEDIXSSGSDCSTGTRG 696
           R  D+GA D+ SSGS+CS  +RG
Sbjct: 176 RRLDAGA-DVASSGSECSDASRG 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,101,235
Number of Sequences: 37544
Number of extensions: 320362
Number of successful extensions: 936
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)