Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_B22
(778 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042167-1|AAH42167.1| 457|Homo sapiens Similar to tumor necros... 32 2.0
BC011844-1|AAH11844.1| 457|Homo sapiens TNFRSF1B protein protein. 32 2.0
X94552-1|CAA64245.1| 915|Homo sapiens glutamate receptor protein. 31 4.6
U92458-1|AAB51763.1| 915|Homo sapiens metabotropic glutamate re... 31 4.6
BC008360-1|AAH08360.1| 432|Homo sapiens family with sequence si... 31 4.6
AF458054-1|AAM47559.1| 906|Homo sapiens metabotropic glutamate ... 31 4.6
AF458053-1|AAM47558.1| 911|Homo sapiens metabotropic glutamate ... 31 4.6
AF458052-1|AAM47557.1| 924|Homo sapiens metabotropic glutamate ... 31 4.6
AB209214-1|BAD92451.1| 656|Homo sapiens Metabotropic glutamate ... 31 4.6
DQ524090-1|ABI35602.1| 120|Homo sapiens immunoglobulin heavy ch... 31 6.1
AY607399-1|AAT02014.1| 114|Homo sapiens non-productive immunogl... 31 6.1
>BC042167-1|AAH42167.1| 457|Homo sapiens Similar to tumor necrosis
factor receptor superfamily, member 1B protein.
Length = 457
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 272 LQRKPTVPRGQQRAGQGSQDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSE 439
L+R+ R + R G+G DP + GARR RL G G LG + H++
Sbjct: 6 LERRRWAARARGREGRGQPDPARTHGARR-RLGRAGRRTGALGCGARLARPGQHAK 60
>BC011844-1|AAH11844.1| 457|Homo sapiens TNFRSF1B protein protein.
Length = 457
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 272 LQRKPTVPRGQQRAGQGSQDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSE 439
L+R+ R + R G+G DP + GARR RL G G LG + H++
Sbjct: 6 LERRRWAARARGREGRGQPDPARTHGARR-RLGRAGRRTGALGCGARLARPGQHAK 60
>X94552-1|CAA64245.1| 915|Homo sapiens glutamate receptor protein.
Length = 915
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 384 CKPGCRSRSRRAPGFCWGSCDPC 316
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>U92458-1|AAB51763.1| 915|Homo sapiens metabotropic glutamate
receptor 7 protein.
Length = 915
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 384 CKPGCRSRSRRAPGFCWGSCDPC 316
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>BC008360-1|AAH08360.1| 432|Homo sapiens family with sequence
similarity 113, member B protein.
Length = 432
Score = 31.1 bits (67), Expect = 4.6
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 645 LLVEESHVR-VHHCRFL*VIGQLVVRTV*QKLVLQLGSQELNTPGTLLA 502
+L+ S VR + H +F+ ++G V R V + LVL L L TPG L A
Sbjct: 2 ILLRASEVRQLLHNKFVVILGDSVHRAVYKDLVLLLQKDRLLTPGQLRA 50
>AF458054-1|AAM47559.1| 906|Homo sapiens metabotropic glutamate
receptor 7 variant 5 protein.
Length = 906
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 384 CKPGCRSRSRRAPGFCWGSCDPC 316
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458053-1|AAM47558.1| 911|Homo sapiens metabotropic glutamate
receptor 7 variant 4 protein.
Length = 911
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 384 CKPGCRSRSRRAPGFCWGSCDPC 316
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AF458052-1|AAM47557.1| 924|Homo sapiens metabotropic glutamate
receptor 7 variant 3 protein.
Length = 924
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 384 CKPGCRSRSRRAPGFCWGSCDPC 316
CKPG R ++++ CW +C+PC
Sbjct: 527 CKPGQRKKTQKGTPCCW-TCEPC 548
>AB209214-1|BAD92451.1| 656|Homo sapiens Metabotropic glutamate
receptor 7 variant protein.
Length = 656
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 384 CKPGCRSRSRRAPGFCWGSCDPC 316
CKPG R ++++ CW +C+PC
Sbjct: 282 CKPGQRKKTQKGTPCCW-TCEPC 303
>DQ524090-1|ABI35602.1| 120|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 120
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 159 AQYKLLKLPFTGELIEHVDYWGEGSIV 239
A Y +L + GEL+ DYWG+G++V
Sbjct: 90 AVYYCARLLWFGELLHTFDYWGQGTLV 116
>AY607399-1|AAT02014.1| 114|Homo sapiens non-productive
immunoglobulin heavy chain CDR3 protein.
Length = 114
Score = 30.7 bits (66), Expect = 6.1
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 159 AQYKLLKLPFTGELIE--HVDYWGEGSIV 239
A Y P+ GEL+E + DYWG+G++V
Sbjct: 82 AVYYCASAPWIGELLERYYFDYWGQGTLV 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,052,573
Number of Sequences: 237096
Number of extensions: 2351866
Number of successful extensions: 16414
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16414
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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