Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B22
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92827-2|CAB07327.2|  394|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U29488-4|AAL27235.1|  401|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n...    29   4.9  
Z83237-2|CAB05789.1|  258|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z36238-1|CAA85275.2|  400|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass...    28   8.6  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   8.6  
AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical ...    28   8.6  
AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical ...    28   8.6  
AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z92827-2|CAB07327.2|  394|Caenorhabditis elegans Hypothetical
           protein C29F7.2 protein.
          Length = 394

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 24/79 (30%), Positives = 37/79 (46%)
 Frame = +3

Query: 90  SAERPNYLTNVDLEYPYSELPYIAQYKLLKLPFTGELIEHVDYWGEGSIVNGGLYSGFRN 269
           S E    LT   L+Y + +L    + K +K+P+T E IE  +Y  + S +NG   + F N
Sbjct: 297 SVENRKNLTKPLLDYYFDKLSSGLEAKGVKMPWTREEIEE-EY--KYSFINGAALTIFAN 353

Query: 270 CYNVNRQYQEVSNGPDKDR 326
            +  N    +    PD  R
Sbjct: 354 GFWANSPVLQTDGKPDPVR 372


>U29488-4|AAL27235.1|  401|Caenorhabditis elegans Hypothetical
           protein C56C10.7a protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -3

Query: 467 NDSRNVSGAVRNDGRAHERHYFDRVILDVSPGVAVVLVAHRDSVGDLAILVRP 309
           N +++V    + +  ++   + ++V LD S    V  +AH D  GD+  L++P
Sbjct: 185 NANQDVYLEAQIENTSNANMFLEKVELDPSQHYNVTSIAHEDEFGDVGKLLKP 237


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 595 SNRAARSPDSIAEACSSARQPGA*YPWDSTGIP*MTTMP 479
           + +A R+P++   AC  A QP   Y + S+G   ++T+P
Sbjct: 346 ATQATRAPETCIPACQPACQPQCVYQYLSSGSSGISTVP 384


>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 20
            protein.
          Length = 1254

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 326  QDPQQNPGARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHYE 460
            Q   Q+PGA      HP +H   L Q+    ++ HH E    H++
Sbjct: 1155 QQQHQHPGAGGHLQLHPQMHMQMLPQHH--QQQQHHEEMMMMHHQ 1197


>Z83237-2|CAB05789.1|  258|Caenorhabditis elegans Hypothetical
           protein R06B9.2 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 603 TDNDGLARGFPQQATSYGSAVQVRVDRGLRQGSDYHE 713
           T  DGLA+  PQ++   G+ +Q  +  G R+   +H+
Sbjct: 202 TVKDGLAKILPQRSQENGNIIQGGILNGFRERGIFHD 238


>Z36238-1|CAA85275.2|  400|Caenorhabditis elegans Hypothetical
           protein R74.2 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 21/75 (28%), Positives = 29/75 (38%)
 Frame = +3

Query: 24  TTHCPPIMSAGRHEMDPHDDWKSAERPNYLTNVDLEYPYSELPYIAQYKLLKLPFTGELI 203
           TT   P+++  R     H  W    R  YL    + Y Y      A Y+   LP+T    
Sbjct: 127 TTTKRPVVAYRRGYFFQHYPWDRLPR-RYLLRPGMTYVYPPQYTFATYRYPHLPYTDHYS 185

Query: 204 EHVDYWGEGSIVNGG 248
            +  + G GS   GG
Sbjct: 186 IYRTHPGIGSGCGGG 200


>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 162 protein.
          Length = 2643

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -1

Query: 211  TCSISSPVKGSLSSLYCAMYGSSEYGYSRSTLVK*LGRSADFQSSCGSISCRPALII 41
            TCS   P +    S YC+ +GSS + Y   +    LG  AD +SSC S   R   +I
Sbjct: 1304 TCSKKDPCRFGQCSQYCSPHGSSHFCYCEDSFK--LG--AD-RSSCISDDPRKPFLI 1355


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 347 GARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 457
           GA  E   H G H G      + H   HHS+  ++ +
Sbjct: 690 GAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726


>AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical
           protein ZK1055.5 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 375 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 503
           RAYI D   +   +    I+   ARD+ R+V++  G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176


>AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical
           protein C33E10.8 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 613 MDSHVAFLNKQLLMDLLFKYVS--TGDYDKAVTITKSLEHDNVGFMIEELI 759
           MD+H    +K+L  D LFK ++       K++TIT+S   D+  +   ELI
Sbjct: 89  MDNHEVVFDKRLTADQLFKKLAPFLRKLPKSITITES--SDDCFYFFRELI 137


>AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical
           protein Y110A2AR.1 protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +3

Query: 150 PYIAQYKLLKLPFTGELIEHVDYW---GEGSIVNGGLYSGFRNCY 275
           P I  +K+LK P    LIE + YW   G   IV+  L + + +C+
Sbjct: 17  PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,509,359
Number of Sequences: 27780
Number of extensions: 347643
Number of successful extensions: 1098
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)