Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_B18
(817 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107749-1|AAI07750.1| 501|Homo sapiens aspartyl-tRNA synthetas... 195 2e-49
J05032-1|AAA35567.1| 500|Homo sapiens protein ( Human aspartyl-... 194 2e-49
BT006710-1|AAP35356.1| 501|Homo sapiens aspartyl-tRNA synthetas... 194 4e-49
BC000629-1|AAH00629.1| 501|Homo sapiens aspartyl-tRNA synthetas... 194 4e-49
AY762100-1|AAX07827.1| 501|Homo sapiens cell proliferation-indu... 194 4e-49
AK222476-1|BAD96196.1| 501|Homo sapiens aspartyl-tRNA synthetas... 193 6e-49
AC093391-1|AAY24055.1| 188|Homo sapiens unknown protein. 165 2e-40
Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3 (Drosoph... 36 0.13
Z98884-3|CAI21434.1| 378|Homo sapiens period homolog 3 (Drosoph... 36 0.13
EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein. 36 0.13
BC026102-1|AAH26102.1| 378|Homo sapiens PER3 protein protein. 36 0.13
AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting prote... 36 0.13
AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein pr... 36 0.13
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 0.93
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 0.93
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 0.93
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 0.93
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 0.93
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 0.93
AC011999-2|AAY15029.1| 313|Homo sapiens unknown protein. 33 1.2
Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3 (Drosoph... 32 2.9
D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein. 32 2.9
BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein. 32 2.9
BC039591-1|AAH39591.1| 458|Homo sapiens ARHGAP25 protein protein. 32 2.9
AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein. 32 2.9
AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) hom... 32 2.9
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 31 6.6
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 31 6.6
>BC107749-1|AAI07750.1| 501|Homo sapiens aspartyl-tRNA synthetase
protein.
Length = 501
Score = 195 bits (475), Expect = 2e-49
Identities = 102/196 (52%), Positives = 132/196 (67%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 19 DAAEDYAKERYGTSSMIQSQ-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 77
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 78 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 135
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLRTPANQA 767
EL +I+ +S A +LPLQ++DA RPE E E + VN DTRLDNRV+DLRT +QA
Sbjct: 136 ELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEG-RATVNQDTRLDNRVIDLRTSTSQA 194
Query: 768 VFRIEAGVCRLFRDIL 815
VFR+++G+C LFR+ L
Sbjct: 195 VFRLQSGICHLFRETL 210
>J05032-1|AAA35567.1| 500|Homo sapiens protein ( Human
aspartyl-tRNA synthetase alpha-2 subunit mRNA, complete
cds. ).
Length = 500
Score = 194 bits (474), Expect = 2e-49
Identities = 102/196 (52%), Positives = 133/196 (67%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 18 DAAEDYAKERYGISSMIQSQ-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 76
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 77 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 134
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLRTPANQA 767
EL +I+ +S A +LPLQ++DA RPE+ E E + VN DTRLDNRV+DLRT +QA
Sbjct: 135 ELHVQKIYVISLAEPRLPLQLDDAVRPEQEGEEEG-RATVNQDTRLDNRVIDLRTSTSQA 193
Query: 768 VFRIEAGVCRLFRDIL 815
VFR+++G+C LFR+ L
Sbjct: 194 VFRLQSGICHLFRETL 209
>BT006710-1|AAP35356.1| 501|Homo sapiens aspartyl-tRNA synthetase
protein.
Length = 501
Score = 194 bits (472), Expect = 4e-49
Identities = 102/196 (52%), Positives = 132/196 (67%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 19 DAAEDYAKERYGISSMIQSQ-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 77
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 78 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 135
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLRTPANQA 767
EL +I+ +S A +LPLQ++DA RPE E E + VN DTRLDNRV+DLRT +QA
Sbjct: 136 ELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEG-RATVNQDTRLDNRVIDLRTSTSQA 194
Query: 768 VFRIEAGVCRLFRDIL 815
VFR+++G+C LFR+ L
Sbjct: 195 VFRLQSGICHLFRETL 210
>BC000629-1|AAH00629.1| 501|Homo sapiens aspartyl-tRNA synthetase
protein.
Length = 501
Score = 194 bits (472), Expect = 4e-49
Identities = 102/196 (52%), Positives = 132/196 (67%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 19 DAAEDYAKERYGISSMIQSQ-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 77
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 78 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 135
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLRTPANQA 767
EL +I+ +S A +LPLQ++DA RPE E E + VN DTRLDNRV+DLRT +QA
Sbjct: 136 ELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEG-RATVNQDTRLDNRVIDLRTSTSQA 194
Query: 768 VFRIEAGVCRLFRDIL 815
VFR+++G+C LFR+ L
Sbjct: 195 VFRLQSGICHLFRETL 210
>AY762100-1|AAX07827.1| 501|Homo sapiens cell
proliferation-inducing protein 40 protein.
Length = 501
Score = 194 bits (472), Expect = 4e-49
Identities = 102/196 (52%), Positives = 132/196 (67%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 19 DAAEDYAKERYGISSMIQSQ-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 77
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 78 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 135
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLRTPANQA 767
EL +I+ +S A +LPLQ++DA RPE E E + VN DTRLDNRV+DLRT +QA
Sbjct: 136 ELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEG-RATVNQDTRLDNRVIDLRTSTSQA 194
Query: 768 VFRIEAGVCRLFRDIL 815
VFR+++G+C LFR+ L
Sbjct: 195 VFRLQSGICHLFRETL 210
>AK222476-1|BAD96196.1| 501|Homo sapiens aspartyl-tRNA synthetase
variant protein.
Length = 501
Score = 193 bits (471), Expect = 6e-49
Identities = 102/196 (52%), Positives = 132/196 (67%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 19 DAAEDYAKERYGISSMIQSH-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 77
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 78 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 135
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLRTPANQA 767
EL +I+ +S A +LPLQ++DA RPE E E + VN DTRLDNRV+DLRT +QA
Sbjct: 136 ELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEG-RATVNQDTRLDNRVIDLRTSTSQA 194
Query: 768 VFRIEAGVCRLFRDIL 815
VFR+++G+C LFR+ L
Sbjct: 195 VFRLQSGICHLFRETL 210
>AC093391-1|AAY24055.1| 188|Homo sapiens unknown protein.
Length = 188
Score = 165 bits (400), Expect = 2e-40
Identities = 90/174 (51%), Positives = 114/174 (65%)
Frame = +3
Query: 228 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 407
++ D+++ YG MIQS E DRV V +L+I+ + VWVRAR+ TSRAKGKQCF
Sbjct: 19 DAAEDYAKERYGISSMIQSQ-EKPDRVLVRVRDLTIQKADEVVWVRARVHTSRAKGKQCF 77
Query: 408 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRESIVDVEASVVRTAAPVESCTIKDV 587
VLRQ VQ LV+V + SKQMVKF NI +ESIVDVE V + + SCT +DV
Sbjct: 78 LVLRQQQFNVQALVAVGDHA--SKQMVKFAANINKESIVDVEGVVRKVNQKIGSCTQQDV 135
Query: 588 ELVAHQIWTVSSARSQLPLQIEDAARPEKSDEPEALKIRVNXDTRLDNRVLDLR 749
EL +I+ +S A +LPLQ++DA RPE E E + VN DTRLDNRV+DLR
Sbjct: 136 ELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEG-RATVNQDTRLDNRVIDLR 188
>Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1201
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYGRYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 229
>Z98884-3|CAI21434.1| 378|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 378
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYGRYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 229
>EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein.
Length = 1201
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYGRYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 229
>BC026102-1|AAH26102.1| 378|Homo sapiens PER3 protein protein.
Length = 378
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYGRYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 229
>AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting protein
13 protein.
Length = 1201
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYGRYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 229
>AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein
protein.
Length = 1201
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYGRYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 229
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.93
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 460 SNGRSANRWSNSPATSRESR*ST-WRLRS*GRPPQSNRAQLRTWNWWLIRYGRYRAPDPS 636
+ GRS +R +PA SR T R RS R P R++ RT R GR R+ P+
Sbjct: 569 TRGRSRSR---TPARRGRSRSRTPARRRSRSRTPTRRRSRSRT----PARRGRSRSRTPA 621
Query: 637 FLCRSRTR-PDRRRVMSRKP*R 699
RSRTR P RRR SR P R
Sbjct: 622 RR-RSRTRSPVRRRSRSRSPAR 642
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 33.5 bits (73), Expect = 0.93
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 460 SNGRSANRWSNSPATSRESR*ST-WRLRS*GRPPQSNRAQLRTWNWWLIRYGRYRAPDPS 636
+ GRS +R +PA SR T R RS R P R++ RT R GR R+ P+
Sbjct: 569 TRGRSRSR---TPARRGRSRSRTPARRRSRSRTPTRRRSRSRT----PARRGRSRSRTPA 621
Query: 637 FLCRSRTR-PDRRRVMSRKP*R 699
RSRTR P RRR SR P R
Sbjct: 622 RR-RSRTRSPVRRRSRSRSPAR 642
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.5 bits (73), Expect = 0.93
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 460 SNGRSANRWSNSPATSRESR*ST-WRLRS*GRPPQSNRAQLRTWNWWLIRYGRYRAPDPS 636
+ GRS +R +PA SR T R RS R P R++ RT R GR R+ P+
Sbjct: 569 TRGRSRSR---TPARRGRSRSRTPARRRSRSRTPTRRRSRSRT----PARRGRSRSRTPA 621
Query: 637 FLCRSRTR-PDRRRVMSRKP*R 699
RSRTR P RRR SR P R
Sbjct: 622 RR-RSRTRSPVRRRSRSRSPAR 642
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.5 bits (73), Expect = 0.93
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 460 SNGRSANRWSNSPATSRESR*ST-WRLRS*GRPPQSNRAQLRTWNWWLIRYGRYRAPDPS 636
+ GRS +R +PA SR T R RS R P R++ RT R GR R+ P+
Sbjct: 534 TRGRSRSR---TPARRGRSRSRTPARRRSRSRTPTRRRSRSRT----PARRGRSRSRTPA 586
Query: 637 FLCRSRTR-PDRRRVMSRKP*R 699
RSRTR P RRR SR P R
Sbjct: 587 RR-RSRTRSPVRRRSRSRSPAR 607
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.5 bits (73), Expect = 0.93
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 460 SNGRSANRWSNSPATSRESR*ST-WRLRS*GRPPQSNRAQLRTWNWWLIRYGRYRAPDPS 636
+ GRS +R +PA SR T R RS R P R++ RT R GR R+ P+
Sbjct: 359 TRGRSRSR---TPARRGRSRSRTPARRRSRSRTPTRRRSRSRT----PARRGRSRSRTPA 411
Query: 637 FLCRSRTR-PDRRRVMSRKP*R 699
RSRTR P RRR SR P R
Sbjct: 412 RR-RSRTRSPVRRRSRSRSPAR 432
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.5 bits (73), Expect = 0.93
Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 460 SNGRSANRWSNSPATSRESR*ST-WRLRS*GRPPQSNRAQLRTWNWWLIRYGRYRAPDPS 636
+ GRS +R +PA SR T R RS R P R++ RT R GR R+ P+
Sbjct: 617 TRGRSRSR---TPARRGRSRSRTPARRRSRSRTPTRRRSRSRT----PARRGRSRSRTPA 669
Query: 637 FLCRSRTR-PDRRRVMSRKP*R 699
RSRTR P RRR SR P R
Sbjct: 670 RR-RSRTRSPVRRRSRSRSPAR 690
>AC011999-2|AAY15029.1| 313|Homo sapiens unknown protein.
Length = 313
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 750 TPANQAVFRIEAGVCRLFRDIL 815
T +QAVFR+++G+C LFR+ L
Sbjct: 1 TSTSQAVFRLQSGICHLFRETL 22
>Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1210
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYG-RYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 230
>D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein.
Length = 666
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 3 RFKSKIENNTLIIKISVDTLIRYF*IDIIMVKSEDPSIVV 122
RF +I+ N + K+SVD L +++I K EDP++++
Sbjct: 314 RFLHEIQLNCAVNKMSVDNLATVIGVNLIRSKVEDPAVIM 353
>BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein.
Length = 1210
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYG-RYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 185 RAQLPFWNNWTQRAAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 230
>BC039591-1|AAH39591.1| 458|Homo sapiens ARHGAP25 protein protein.
Length = 458
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 3 RFKSKIENNTLIIKISVDTLIRYF*IDIIMVKSEDPSIVV 122
RF +I+ N + K+SVD L +++I K EDP++++
Sbjct: 287 RFLHEIQLNCAVNKMSVDNLATVIGVNLIRSKVEDPAVIM 326
>AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 3 RFKSKIENNTLIIKISVDTLIRYF*IDIIMVKSEDPSIVV 122
RF +I+ N + K+SVD L +++I K EDP++++
Sbjct: 206 RFLHEIQLNCAVNKMSVDNLATVIGVNLIRSKVEDPAVIM 245
>AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila)
homolog 3 hPER3 protein.
Length = 1233
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 568 RAQLRTWNWWLIRYG-RYR-APDPSFLCRSRTRPDRRRVMSRKP*R 699
RAQL WN W R RY AP F CR R DR++ P R
Sbjct: 208 RAQLPFWNNWTQRAAARYECAPVKPFFCRIRGGEDRKQEKCHSPFR 253
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 30.7 bits (66), Expect = 6.6
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Frame = +2
Query: 533 GFGREDGRPSRIVHN*GRGTGGSSDMDGIERQIPASSADRGRGQTGEE**AGSL--EDPR 706
G R+ R H +GT G DG+E + RG+ G + G + + P+
Sbjct: 222 GSRRKTAAHGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQ 281
Query: 707 EPXHPARQSG----FGS-AHAG*PGRLQDRG-------RGLQALQGYP 814
P P ++G GS + G PG L ++G RGLQ G P
Sbjct: 282 GPPGPGGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSP 329
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 30.7 bits (66), Expect = 6.6
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +1
Query: 460 SNGRSANRW-SNSPATSRESR*STWRLRS*GRPPQSNRAQLR------TWNWWLIRYGRY 618
S GRS +R S SP+ R R R RS R + R++ R + + +R R
Sbjct: 14 SRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRS 73
Query: 619 RAPDPSFLCRSRTRPDRRRVMSRKP*RSA*TXTPGS 726
R D S R DRRR SR R + + +PGS
Sbjct: 74 RERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGS 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,023,737
Number of Sequences: 237096
Number of extensions: 2106559
Number of successful extensions: 9754
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9732
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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