Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B17
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118945-1|AAM50805.1|  166|Drosophila melanogaster LD31024p pro...   221   6e-58
AE014296-3728|AAF51870.1|  166|Drosophila melanogaster CG11137-P...   221   6e-58
AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p pro...    29   5.2  
AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-P...    29   5.2  

>AY118945-1|AAM50805.1|  166|Drosophila melanogaster LD31024p
           protein.
          Length = 166

 Score =  221 bits (541), Expect = 6e-58
 Identities = 104/164 (63%), Positives = 129/164 (78%)
 Frame = +1

Query: 175 MSQLKSNKKLKWALDFNQKNKQLSTELPSPPGYSQSSNANYAESSKDSDSNLLLIKKLWD 354
           MS  ++ KKLKWALDFN      + ++PSP GY+ S+  N +E  +D     L+IKK WD
Sbjct: 1   MSAKQNPKKLKWALDFNGSK---NADIPSPLGYNPSALVNQSEVVRDQR---LVIKKSWD 54

Query: 355 VALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVEGTQAIGQ 534
           +ALGPLK +PMNLFIMYM+GNSISIFPIMMVGM+++RP+KA+F TQ T KM EG Q  GQ
Sbjct: 55  LALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQ 114

Query: 535 KIVYCIGNIVNILLALYKCQSMGLLPTHSSDWLAFEEPQTRLEH 666
           +IVY +GN+ N+ LALYKCQSMGLLPTH+SDWLAF +PQTRLE+
Sbjct: 115 RIVYFLGNLANVALALYKCQSMGLLPTHASDWLAFVQPQTRLEY 158


>AE014296-3728|AAF51870.1|  166|Drosophila melanogaster CG11137-PA
           protein.
          Length = 166

 Score =  221 bits (541), Expect = 6e-58
 Identities = 104/164 (63%), Positives = 129/164 (78%)
 Frame = +1

Query: 175 MSQLKSNKKLKWALDFNQKNKQLSTELPSPPGYSQSSNANYAESSKDSDSNLLLIKKLWD 354
           MS  ++ KKLKWALDFN      + ++PSP GY+ S+  N +E  +D     L+IKK WD
Sbjct: 1   MSAKQNPKKLKWALDFNGSK---NADIPSPLGYNPSALVNQSEVVRDQR---LVIKKSWD 54

Query: 355 VALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVEGTQAIGQ 534
           +ALGPLK +PMNLFIMYM+GNSISIFPIMMVGM+++RP+KA+F TQ T KM EG Q  GQ
Sbjct: 55  LALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQ 114

Query: 535 KIVYCIGNIVNILLALYKCQSMGLLPTHSSDWLAFEEPQTRLEH 666
           +IVY +GN+ N+ LALYKCQSMGLLPTH+SDWLAF +PQTRLE+
Sbjct: 115 RIVYFLGNLANVALALYKCQSMGLLPTHASDWLAFVQPQTRLEY 158


>AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p
           protein.
          Length = 1478

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 510 NHFESTLCSKQRLHRPHY*HANHHYWKYRDRVTSHVHNKKIHG 382
           NH +      Q+ H  H  H NHH  + + +   H+H  ++HG
Sbjct: 25  NHQQHHAGHHQQQHMHHQHHQNHHQ-QLQQQQLPHLHTLQLHG 66


>AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-PA
           protein.
          Length = 1843

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 510 NHFESTLCSKQRLHRPHY*HANHHYWKYRDRVTSHVHNKKIHG 382
           NH +      Q+ H  H  H NHH  + + +   H+H  ++HG
Sbjct: 390 NHQQHHAGHHQQQHMHHQHHQNHHQ-QLQQQQLPHLHTLQLHG 431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,201,231
Number of Sequences: 53049
Number of extensions: 651882
Number of successful extensions: 1701
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)