Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B12
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         239   6e-65
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         239   6e-65
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         239   6e-65
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          219   9e-59
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        27   0.73 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.0  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  239 bits (585), Expect = 6e-65
 Identities = 111/112 (99%), Positives = 111/112 (99%)
 Frame = +3

Query: 39  PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
           P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324

Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
           TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 30.3 bits (65), Expect = 0.059
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 14  RCPEALFQPSXLG 52
           RCPEALFQPS LG
Sbjct: 257 RCPEALFQPSFLG 269


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  239 bits (585), Expect = 6e-65
 Identities = 111/112 (99%), Positives = 111/112 (99%)
 Frame = +3

Query: 39  PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
           P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324

Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
           TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 30.3 bits (65), Expect = 0.059
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 14  RCPEALFQPSXLG 52
           RCPEALFQPS LG
Sbjct: 257 RCPEALFQPSFLG 269


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  239 bits (585), Expect = 6e-65
 Identities = 111/112 (99%), Positives = 111/112 (99%)
 Frame = +3

Query: 39  PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
           P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324

Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
           TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 30.3 bits (65), Expect = 0.059
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 14  RCPEALFQPSXLG 52
           RCPEALFQPS LG
Sbjct: 257 RCPEALFQPSFLG 269


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  219 bits (534), Expect = 9e-59
 Identities = 100/112 (89%), Positives = 105/112 (93%)
 Frame = +3

Query: 39  PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
           P FLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGGTTMYPGIADRMQKEIT+LAPS
Sbjct: 265 PSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPS 324

Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
           T+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 325 TIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376



 Score = 27.1 bits (57), Expect = 0.55
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +2

Query: 14  RCPEALFQPSXLGYGS 61
           R PEALFQPS LG  S
Sbjct: 257 RAPEALFQPSFLGMES 272


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 331 STTSLAPPLYTGSASKRTARRCLQQPAAGCSIQA 432
           S  +L   LY GSAS+    R LQQ  +G + QA
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQA 103


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 278  IDPRLPLYLPTDVDLETGVRRVW 346
            +DP + LYL T+  L+ G +  W
Sbjct: 1188 LDPDIRLYLKTNTYLQWGDKLFW 1210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,270
Number of Sequences: 2352
Number of extensions: 14456
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)