Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_B12
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 232 2e-61
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 232 2e-61
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 232 2e-61
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 232 2e-61
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 232 2e-61
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 232 2e-61
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 232 2e-61
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 232 2e-61
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 232 2e-61
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 226 1e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 223 1e-58
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 122 2e-28
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 7e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 94 7e-20
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 78 7e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 59 3e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.58
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.58
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.58
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.1
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.1
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEA+FQPS LG S
Sbjct: 257 RCPEAMFQPSFLGMES 272
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEALFQPS LG S
Sbjct: 257 RCPEALFQPSFLGMES 272
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEA+FQPS LG S
Sbjct: 257 RCPEAMFQPSFLGMES 272
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEALFQPS LG S
Sbjct: 257 RCPEALFQPSFLGMES 272
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEALFQPS LG S
Sbjct: 257 RCPEALFQPSFLGMES 272
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEA+FQPS LG S
Sbjct: 257 RCPEAMFQPSFLGMES 272
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 221 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 280
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 281 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEALFQPS LG S
Sbjct: 213 RCPEALFQPSFLGMES 228
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 251 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 310
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 311 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEALFQPS LG S
Sbjct: 243 RCPEALFQPSFLGMES 258
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 232 bits (568), Expect = 2e-61
Identities = 107/112 (95%), Positives = 110/112 (98%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEALFQPS LG S
Sbjct: 257 RCPEALFQPSFLGMES 272
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 226 bits (553), Expect = 1e-59
Identities = 106/112 (94%), Positives = 109/112 (97%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P FLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP- 323
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 14 RCPEALFQPSXLGYGS 61
RCPEA+FQPS LG S
Sbjct: 257 RCPEAMFQPSFLGMES 272
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 223 bits (544), Expect = 1e-58
Identities = 103/112 (91%), Positives = 106/112 (94%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPS
Sbjct: 264 PAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPS 323
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 122 bits (294), Expect = 2e-28
Identities = 55/112 (49%), Positives = 77/112 (68%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+
Sbjct: 263 PDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPA 322
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 374
KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 323 DGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 7e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = +3
Query: 105 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 275
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 276 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 371
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 94.3 bits (224), Expect = 7e-20
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 13/126 (10%)
Frame = +3
Query: 9 RSVAQRLSSNPRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 188
R A + P + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R+
Sbjct: 258 RFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRL 317
Query: 189 QKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQ 329
+KE+ L A KI+I APP RK+ V++GG++LA+L Q W+SK+
Sbjct: 318 EKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKK 377
Query: 330 EYDESG 347
EY+E G
Sbjct: 378 EYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 83.0 bits (196), Expect = 2e-16
Identities = 33/98 (33%), Positives = 65/98 (66%)
Frame = +3
Query: 39 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 218
P+ G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+
Sbjct: 442 PKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPN 501
Query: 219 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 332
T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 502 TIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.8 bits (183), Expect = 7e-15
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Frame = +3
Query: 9 RSVAQRLSSNPRFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 185
R + + +P F E I +T I +C +D+R+ LY N VLSGG+TM+ A +
Sbjct: 282 RFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARK 341
Query: 186 MQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 317
+Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S F Q+
Sbjct: 342 LQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVS 401
Query: 318 ISKQEYDESGPSI 356
+K EY E GPSI
Sbjct: 402 HTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = +3
Query: 36 NPRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 215
NP + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++ P
Sbjct: 278 NPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLP 337
Query: 216 STMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 380
+ + + + P+ W G L L+ + WI+++++DE G S+ F T
Sbjct: 338 AEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Frame = +3
Query: 36 NPRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 215
NP + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++ P
Sbjct: 278 NPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLP 337
Query: 216 STMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 380
+ + + + P+ W G L L+ + WI+++++DE G S+ F T
Sbjct: 338 AEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = +3
Query: 93 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 257
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 258 ----YSVWIGGSILASL-STFQQMWISKQEY 335
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 269 PYGVLPLWRSNDLNLHCRWGESCD 198
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 269 PYGVLPLWRSNDLNLHCRWGESCD 198
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 269 PYGVLPLWRSNDLNLHCRWGESCD 198
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 433 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 341
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 330 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 431
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 433 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 341
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 249 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 410
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,547,644
Number of Sequences: 27780
Number of extensions: 298929
Number of successful extensions: 852
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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