Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_B10
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.54
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 0.54
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 29 0.71
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 29 0.94
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces... 27 2.9
SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c... 27 2.9
SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.8
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 26 5.0
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 26 5.0
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 6.6
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 6.6
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 25 8.7
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 25 8.7
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 29.5 bits (63), Expect = 0.54
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 401 ETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLSQWKHDKQNW 556
E+ D+ SI + K ENY+ + +S+N + +Y+S+ + Q+W
Sbjct: 153 ESMDQSAPPSITEDKGENYISSNHSSMHISRNDSR----NYMSEKPNKDQSW 200
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 29.5 bits (63), Expect = 0.54
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +2
Query: 452 NYLKRQAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESW 631
N LK + L K LK C++ LS+ + V L+L N + + DE+W
Sbjct: 378 NSLKNIFEEDNLGKTSLK--CVTILSRMFKQRNYDVLPDVYDLFLSVNILNDMKIKDEAW 435
Query: 632 QTLIEYFESAKGNVRTLLLEDAKKVIKQMDEWTEK 736
Q F+ K ++ L + A+K K+ + T++
Sbjct: 436 QDDTTNFKKRKKDL-PYLTKKARKNYKETKKITQE 469
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.71
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +2
Query: 461 KRQAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTL 640
K ++ E + Q + SY S + ++ K K K+ K+K +S + L
Sbjct: 442 KLGTKSPESCRKQYEKTIASYSSNQRQEEDQGK--KRKKRKKKKSKGKRKFYVADSLK-L 498
Query: 641 IEYFESAKGNVRTLLLEDAKKVIKQMDEWTEK 736
+E+ + G ++ D K ++KQM +W+E+
Sbjct: 499 LEHVQRQCGEAISINAIDWKGIVKQMPKWSEE 530
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 28.7 bits (61), Expect = 0.94
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 562 ELPVLFVMFPLGKIAETLRFELIF*KFCSLGLTFKIVFSLC 440
E+PV ++PL K + + L+ ++C+L +T K S C
Sbjct: 203 EIPVNITLYPLLKGLDVGKVTLVLKEYCTLFITSKAYSSTC 243
>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 357 KKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKL 479
+K R+ K++ L Q I+ K Y+K RE+ + V PKL
Sbjct: 226 EKFRLYHKQEKYSLLMQEIENAKKLYEKDRER-LAKVNPKL 265
>SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 327 SDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVK 425
S +T TP +K ++ K+KRK + +++K K
Sbjct: 76 SSHTFQTPTKKGNKTKKKRKKEKKKETIVEKNK 108
>SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 355 CIGVINVLS----LNCRRFRFNFIVLLVSFCFLF 266
C+ +++LS +NC F N+ +LLVS F F
Sbjct: 68 CMSTVSLLSSAHKMNCCNFYSNYNILLVSSLFFF 101
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -3
Query: 726 HSSICLMTFFASSSNNVRTFPFADSKYSIRVCQDSSGTKLVENLF--LSSHNCLTFMNFQ 553
++S +M+F S++ N ++PF+ + + V +++G + N++ S + + F N
Sbjct: 231 YTSRNIMSFLLSNNTNTSSYPFSVNGVELDVWNENAGV-FINNIYFGFSLSDAMKFENET 289
Query: 552 F 550
F
Sbjct: 290 F 290
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 414 KKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIFPSGNMTNKTG 557
K VK R +KQR I + QN K+N+ L+ + + KTG
Sbjct: 439 KIVKERLEKQRASKI-----RSQNRPKVNAGLASRLSYQENKLRKKTG 481
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 321 QLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPK 476
Q S++ +KK + +RK P L K KS +DK R+KT + + +
Sbjct: 102 QKSNSKESHAQRKKLQKERKAMKPFADTSL--KAKSLWDKLRQKTSIKAEER 151
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.8 bits (54), Expect = 6.6
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 467 QAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIE 646
Q Q A L+ Q+ S CLS+L+ + W + + QLW ++ + D + L E
Sbjct: 612 QGQLACLNP-QVLSHCLSHLNSPDSLLRQWACLCISQLWENYSEAKWSGTRDNAHVKLAE 670
Query: 647 YFESAKGNVRTLLL 688
+ VR +L
Sbjct: 671 IIVDSVPEVRASVL 684
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 567 FMNFQFCLSCFHWE 526
F++ + C CFHWE
Sbjct: 203 FVSLKHCEDCFHWE 216
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 341 DDSDAEETPRXXXXXXPVITETTDKKGKKSIRQTKRENYLKRQAQAA 481
+D++ + TP +++E KKG K I K +R+A+ A
Sbjct: 748 EDTNNQSTPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRA 794
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,477
Number of Sequences: 5004
Number of extensions: 47435
Number of successful extensions: 199
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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