Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B10
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0910 - 22522465-22522473,22522565-22522651,22522707-225227...    32   0.56 
02_04_0103 - 19768288-19768737                                         31   1.3  
02_02_0524 + 11179224-11179469,11179543-11181465                       29   5.2  
01_07_0105 - 41104655-41104851,41105818-41107150                       28   6.9  
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452...    28   9.1  
06_01_0137 - 1045301-1047601                                           28   9.1  
06_01_0124 - 958935-959967,959985-961222                               28   9.1  
04_01_0476 + 6215401-6217445,6217538-6217630,6218031-6218133,621...    28   9.1  

>08_02_0910 -
           22522465-22522473,22522565-22522651,22522707-22522768,
           22523170-22523697,22524954-22525047
          Length = 259

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +2

Query: 515 LSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDE 625
           ++Y+S + H    +KF+K K L L++ + + N++P+E
Sbjct: 209 MNYISGFYHKTHIYKFVKKKNLPLIERELTENVIPNE 245


>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 348 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 452
           PM++K R KRKRK     K+  KK K +  K+++K
Sbjct: 99  PMREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKK 133


>02_02_0524 + 11179224-11179469,11179543-11181465
          Length = 722

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +3

Query: 279 KETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTI 458
           ++  R   L    R  +D  L +P   +   + K K P L   L KKV S+ D+  E+ +
Sbjct: 636 QDVLREAALASTSRSAADYDLPSPAVSRRGRRGKTKGPTLASMLKKKVTSK-DRIAER-L 693

Query: 459 LNVKPKLQNFQKIN--SNLSVSAIFPS 533
           LN + +    ++++   ++S    FP+
Sbjct: 694 LNARARDATIREVSHTEDMSYREAFPN 720


>01_07_0105 - 41104655-41104851,41105818-41107150
          Length = 509

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 344 DSDAEETPRXXXXXXPVITET-TDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQ 511
           D D +   +        +T T TD+KG++ + + K+++  ++QA AA +   + + Q
Sbjct: 442 DDDGQSDGKQTIELKEAMTATKTDEKGEEQVAKDKKDDEQEQQATAAPIESPKQEQQ 498


>08_01_0519 -
           4518256-4519623,4520840-4521230,4521313-4521525,
           4521632-4521723,4522226-4522342,4522641-4522704,
           4523175-4523228,4523579-4523666,4523788-4524023,
           4525258-4525478,4525634-4525827,4525938-4525995,
           4526771-4526824,4526851-4527473,4527580-4527640,
           4528417-4528590,4528803-4529063,4529201-4529320,
           4529388-4530022,4530062-4530828,4530915-4531012,
           4531101-4531155,4531230-4531318
          Length = 2010

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/58 (22%), Positives = 32/58 (55%)
 Frame = +2

Query: 428 SIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKF 601
           ++ + + E+ + R+A+  E++  +   + L  +S  K  K +W+F+  +  W + N+F
Sbjct: 530 TVAKKEHEDTILRRARLIEVNIKKAGERSLCNISLEKKPKSHWEFVLEEMAW-MANEF 586


>06_01_0137 - 1045301-1047601
          Length = 766

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = +2

Query: 530 QWKHDKQNWK-FMKVKQ---LWL--LKNKFSTNLVPDESWQTLIEYFESAKGNVRTL 682
           QW  ++ + + +++VKQ   LW   L  K     VP+E+ Q+++EY  +  G V  L
Sbjct: 488 QWVTNRMSRRNYLRVKQYSVLWFCRLPLKLPAAAVPEEAKQSIVEYLAAYDGAVAPL 544


>06_01_0124 - 958935-959967,959985-961222
          Length = 756

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = +2

Query: 530 QWKHDKQNWK-FMKVKQ---LWL--LKNKFSTNLVPDESWQTLIEYFESAKGNVRTL 682
           QW  ++ + + +++VKQ   LW   L  K     VP+E+ Q+++EY  +  G V  L
Sbjct: 478 QWVTNRMSRRNYLRVKQYSVLWFCRLPLKLPAAAVPEEAKQSIVEYLAAYDGAVAPL 534


>04_01_0476 +
           6215401-6217445,6217538-6217630,6218031-6218133,
           6218237-6218254
          Length = 752

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = +2

Query: 467 QAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNK 598
           Q    +L+ + L +Q +  L ++K D+++W+ +  ++LW ++ K
Sbjct: 408 QELVKKLAGSPLAAQTVGNLLKFKLDEKHWETVNGRKLWQIEQK 451


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,687,671
Number of Sequences: 37544
Number of extensions: 241987
Number of successful extensions: 690
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)