Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B10
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    34   0.12 
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    34   0.12 
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    34   0.12 
Z81086-6|CAB03116.1|  610|Caenorhabditis elegans Hypothetical pr...    32   0.38 
U50301-12|AAB37053.2|  486|Caenorhabditis elegans Hypothetical p...    32   0.50 
Z49071-6|CAA88876.2|  292|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U46753-2|AAA85760.1|  894|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U56963-8|AAB38121.1|  155|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U23517-1|AAB93336.1|  245|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U23171-5|AAC46705.2|  158|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical...    28   6.2  
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z69904-1|CAA93777.1|  420|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80032-5|AAB53878.1|  552|Caenorhabditis elegans Hypothetical pr...    28   8.1  
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe...    28   8.1  
AF038608-11|AAC25815.1|  319|Caenorhabditis elegans Serpentine r...    28   8.1  

>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
 Frame = +3

Query: 276  QKETRRTMKLNRN--LRQLSD--NTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQ 443
            +K+  R  +L+ N  L  ++D  + L  P + K  +K+K+K     K  +K+ +     Q
Sbjct: 8546 KKDESRPDRLDDNCVLTDVTDGLSILSPPPKAKKHLKKKKKHHKKEKIAVKETE-----Q 8600

Query: 444  REKTILNVKPKLQNFQKINSNLSVSAIF-----PSGNMTNKTGSS*KLNSYGY 587
             EKT+ ++KP++   ++  SN   S IF      +G  +  T +   LN Y Y
Sbjct: 8601 DEKTVSHLKPEISGMERKRSNSGSSDIFVDVDIEAGEESIHTDALVDLNFYDY 8653


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
 Frame = +3

Query: 276  QKETRRTMKLNRN--LRQLSD--NTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQ 443
            +K+  R  +L+ N  L  ++D  + L  P + K  +K+K+K     K  +K+ +     Q
Sbjct: 8566 KKDESRPDRLDDNCVLTDVTDGLSILSPPPKAKKHLKKKKKHHKKEKIAVKETE-----Q 8620

Query: 444  REKTILNVKPKLQNFQKINSNLSVSAIF-----PSGNMTNKTGSS*KLNSYGY 587
             EKT+ ++KP++   ++  SN   S IF      +G  +  T +   LN Y Y
Sbjct: 8621 DEKTVSHLKPEISGMERKRSNSGSSDIFVDVDIEAGEESIHTDALVDLNFYDY 8673


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
 Frame = +3

Query: 276  QKETRRTMKLNRN--LRQLSD--NTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQ 443
            +K+  R  +L+ N  L  ++D  + L  P + K  +K+K+K     K  +K+ +     Q
Sbjct: 8566 KKDESRPDRLDDNCVLTDVTDGLSILSPPPKAKKHLKKKKKHHKKEKIAVKETE-----Q 8620

Query: 444  REKTILNVKPKLQNFQKINSNLSVSAIF-----PSGNMTNKTGSS*KLNSYGY 587
             EKT+ ++KP++   ++  SN   S IF      +G  +  T +   LN Y Y
Sbjct: 8621 DEKTVSHLKPEISGMERKRSNSGSSDIFVDVDIEAGEESIHTDALVDLNFYDY 8673


>Z81086-6|CAB03116.1|  610|Caenorhabditis elegans Hypothetical
           protein F53B6.6 protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 28/72 (38%), Positives = 35/72 (48%)
 Frame = -1

Query: 449 LSLFVVSTFYLFYQLXXXXXXXXXXXXXXFLLHRSHQRVVA*LPQVSIQFHRPPRFLLLP 270
           LSLF+V T Y FY +                LH   Q VVA L   S+QF  PP  LLL 
Sbjct: 3   LSLFIVKTVYTFYWVVLEKVQ----------LHSFKQYVVA-LRFESVQFKNPP-ILLLL 50

Query: 269 VCDRLVLRKILI 234
           + +R+ L+ I I
Sbjct: 51  IYNRIFLQSITI 62


>U50301-12|AAB37053.2|  486|Caenorhabditis elegans Hypothetical
           protein F20D6.10 protein.
          Length = 486

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 18/77 (23%), Positives = 38/77 (49%)
 Frame = +3

Query: 273 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 452
           K+  +  T ++  +LR++S        +  H  + K  SP +PK+  K   S   ++ +K
Sbjct: 352 KKTASEGTSRIEDDLRRMSSTKEHHHKEHIHHAESK-DSPNMPKRYAKLKSSESSRESQK 410

Query: 453 TILNVKPKLQNFQKINS 503
           T +  +P L+  + ++S
Sbjct: 411 TSVTRRPSLKKNRSVDS 427


>Z49071-6|CAA88876.2|  292|Caenorhabditis elegans Hypothetical
           protein T22C8.4 protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 320 AVKRQHVDDSDAEETPRXXXXXXPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQ 499
           A KR+ +D S      +        + +  +K+ K+  R  KRE  LK++++ A   KN+
Sbjct: 86  APKRRRIDKSSTSSEAKIQRMED-AMKKKLEKEQKEKARLKKREETLKKKSETAAAKKNK 144

Query: 500 L 502
           +
Sbjct: 145 I 145


>U46753-2|AAA85760.1|  894|Caenorhabditis elegans Hypothetical
           protein C34F11.5 protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +3

Query: 273 KQKETRRTMKLNR-NLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRY--DKQ 443
           K+KE   T+K+ + +  + +   +    +K+ R KR+ +  ++ K+L KK++ RY   K+
Sbjct: 680 KRKEIVLTLKVRKASTAKKTKKAMQEKKRKRLRAKRRLRRFIMRKRLKKKLRKRYRGAKR 739

Query: 444 REK 452
           R K
Sbjct: 740 RRK 742


>U56963-8|AAB38121.1|  155|Caenorhabditis elegans Hypothetical
           protein T13A10.1 protein.
          Length = 155

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 348 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQN 485
           P ++K ++K + K P  PK+   K      +++E T   VKPK Q+
Sbjct: 70  PKKEKSKMKSEVKEPDAPKKENDKTSEDKKEKQEDTFDAVKPKQQD 115


>U23517-1|AAB93336.1|  245|Caenorhabditis elegans Hypothetical
           protein D1022.3 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 358 FCIGVINVLSLNCRRFRFNFIVLLVSF 278
           FCIG   + SL+C R+RF+ I  ++SF
Sbjct: 123 FCIG--GLCSLDCARYRFDGIRAVISF 147


>U23171-5|AAC46705.2|  158|Caenorhabditis elegans Hypothetical
           protein K02A2.1 protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 358 FCIGVINVLSLNCRRFRFNFIVLLVSF 278
           FCIG   + SL+C R+RF+ I  ++SF
Sbjct: 36  FCIG--GLCSLDCARYRFDGIRAVISF 60


>AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical
           protein F36H12.5 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 348 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQN 485
           P ++K ++K + K P  PK+  K    + +KQ E T   VKPK Q+
Sbjct: 70  PKKEKSKMKSEVKEPDAPKKDDKTSDEKKEKQ-EDTFDAVKPKQQD 114


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = +3

Query: 273 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 452
           ++KE +R M+  RN+ +   +T     +     K+K+K     K    K K + +K++ K
Sbjct: 258 RRKEKKREMRAVRNVSEDDSSTSSESEESDFEQKKKKKVKKSKKSKKDKKKEKKEKKKSK 317


>Z69904-1|CAA93777.1|  420|Caenorhabditis elegans Hypothetical
           protein ZK20.1 protein.
          Length = 420

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 387 SPLLPKQLIKKVKS-RYDKQREKTILNVKPKLQNFQKINSNL 509
           SP+LP+Q+  K+KS   D+ +E    N     Q F K+NS+L
Sbjct: 142 SPVLPEQISAKIKSDLLDQLKEAACSNA---TQFFSKLNSHL 180


>U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical
           protein C01F4.2b protein.
          Length = 622

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +2

Query: 524 LSQWKHDKQNWKFMKVKQLWLLKNKF------STNLVPDESWQTL 640
           LS      + WK+   K LW LK K+      ST+   D +W++L
Sbjct: 255 LSASSSHSEGWKYSSQKLLWKLKPKYAYSHASSTSSSTDSAWKSL 299


>U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical
           protein C01F4.2a protein.
          Length = 986

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +2

Query: 524 LSQWKHDKQNWKFMKVKQLWLLKNKF------STNLVPDESWQTL 640
           LS      + WK+   K LW LK K+      ST+   D +W++L
Sbjct: 255 LSASSSHSEGWKYSSQKLLWKLKPKYAYSHASSTSSSTDSAWKSL 299


>U80032-5|AAB53878.1|  552|Caenorhabditis elegans Hypothetical
           protein C32E12.1 protein.
          Length = 552

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 351 MQKKHRVKRKRKSPLLPKQLIKK-VKSRYDKQREK 452
           + KK   K K +SP+ PK++  K VK++ DK+ +K
Sbjct: 3   VHKKTEKKTKTESPVKPKKVASKHVKNKKDKKDKK 37


>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
           defective protein 45 protein.
          Length = 1076

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/72 (22%), Positives = 42/72 (58%)
 Frame = +3

Query: 273 KQKETRRTMKLNRNLRQLSDNTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREK 452
           +Q E ++ +K ++ L ++  N +   + K+  +++ R     P+Q++++ + R DK+R +
Sbjct: 638 EQDEIQKKIKQDQ-LYKMQQNAIYQEIIKEKGLEQFRDMD--PEQVLREQRERLDKERAE 694

Query: 453 TILNVKPKLQNF 488
           T   ++ + +NF
Sbjct: 695 TQRRLQQQEKNF 706


>AF038608-11|AAC25815.1|  319|Caenorhabditis elegans Serpentine
           receptor, class z protein79 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -2

Query: 370 TRCFFCIGVINVLSLNC----RRFRFNFIVLLVSFCFLFAI 260
           T C F I +   + + C    RRF F F V++V+ C +F +
Sbjct: 72  TYCMFGILIFCNIMILCNNPGRRFFFGFFVIVVAMCIVFTL 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,975,062
Number of Sequences: 27780
Number of extensions: 258029
Number of successful extensions: 1236
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)