Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B07
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical...    30   2.0  
AC006810-2|AAF59631.2|  297|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = -3

Query: 580 IIERVSKIFIALNSRRARNPAHDKWSPVIINFSSAIGVAVYHLSFNKLLIYSVTSILISH 401
           I E V +  + +++        +KWS +++  + A+ + +  L F   L+Y  T +L S 
Sbjct: 643 IAEEVLETKLDISTFFYNKKMREKWSNMVLGITCAMCICMSLLVFIMGLVYMTTVVLASQ 702

Query: 400 NENV 389
            E+V
Sbjct: 703 TEHV 706


>AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = -3

Query: 580 IIERVSKIFIALNSRRARNPAHDKWSPVIINFSSAIGVAVYHLSFNKLLIYSVTSILISH 401
           I E V +  + +++        +KWS +++  + A+ + +  L F   L+Y  T +L S 
Sbjct: 643 IAEEVLETKLDISTFFYNKKMREKWSNMVLGITCAMCICMSLLVFIMGLVYMTTVVLASQ 702

Query: 400 NENV 389
            E+V
Sbjct: 703 TEHV 706


>AC006810-2|AAF59631.2|  297|Caenorhabditis elegans Hypothetical
           protein Y5H2B.4 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 720 YKPLVYILLQKKLVFVTCK*IIXIHMXTXN 631
           YK +VYIL     + +TCK ++ IH    N
Sbjct: 178 YKTIVYILTFLSTIVLTCKLLLKIHESQSN 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,189,760
Number of Sequences: 27780
Number of extensions: 271520
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)