Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B06
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF235809-1|AAK13939.1|   73|Homo sapiens immunoglobulin heavy ch...    31   3.9  
AK097556-1|BAC05100.1|  518|Homo sapiens protein ( Homo sapiens ...    30   6.8  

>AF235809-1|AAK13939.1|   73|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 73

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 567 WICEDRTLLVFLPWILPSYYYF 502
           + C  +++L +  W+LPSYYY+
Sbjct: 44  YYCATKSVLRYFDWLLPSYYYY 65


>AK097556-1|BAC05100.1|  518|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40237 fis, clone TESTI2023414. ).
          Length = 518

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
 Frame = +3

Query: 327 LESNMNTETEPSPKKKTDKIT---DNLTVSLEKC----DIKKIEKSDEEPKPRIVLTIRS 485
           LE N+ ++  P   ++T+ +T   D  T  LE      D  KI+K+ E P+PR ++ +  
Sbjct: 8   LELNIGSQLGPKSPERTEGVTAFEDYGTGLLENQLSVGDFVKIQKAFESPQPRKIICMSR 67

Query: 486 EKSNAKNSNMKVVSTEEKQEEFCPRRSSRTRGKWEW 593
           E    K + +    T+E+  E   +      G   W
Sbjct: 68  EDFTQKMTEIVGWGTKEEYGELFDKVDVAQDGFINW 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,286,871
Number of Sequences: 237096
Number of extensions: 1956271
Number of successful extensions: 5065
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5043
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)