Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_B03
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    27   0.14 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.98 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.9  

>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +3

Query: 456 KICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVKCRNELLYFAGGENLPGFDDLKKAD 635
           K C  +I I + L D   GM+ G  P  H L C+  C  +LL      N   FD + K  
Sbjct: 38  KSCLQKIAITEELVD---GMRRGEFPDDHDLQCYTTCIMKLLRTFKNGNF-DFDMIVKQL 93

Query: 636 QIIVKTE 656
           +I +  E
Sbjct: 94  EITMPPE 100


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 597 ENLPGFDDLKKADQI 641
           + LPGFD+L + DQI
Sbjct: 394 KRLPGFDELMREDQI 408


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -1

Query: 722 FFVXYFILQFFYWNV 678
           F++   ++ FFYW +
Sbjct: 256 FYIPMLVMLFFYWRI 270


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 597 ENLPGFDD 620
           EN+PGFDD
Sbjct: 258 ENIPGFDD 265


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 597 ENLPGFDD 620
           EN+PGFDD
Sbjct: 348 ENIPGFDD 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,855
Number of Sequences: 438
Number of extensions: 3277
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)