Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_A20
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00037-5|AAA50659.1|  235|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical pr...    29   2.6  
L23110-1|AAA03544.1|  744|Caenorhabditis elegans BMP receptor pr...    29   2.6  
AF047651-12|AAN63460.1|  592|Caenorhabditis elegans Abnormal dau...    29   2.6  
AF047651-10|AAC02726.1|  744|Caenorhabditis elegans Abnormal dau...    29   2.6  
Z83216-9|CAB05678.1|  111|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z69663-1|CAA93511.1|  636|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U00037-5|AAA50659.1|  235|Caenorhabditis elegans Hypothetical
           protein T20H4.2 protein.
          Length = 235

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 463 CGCKAYTQKGTLHKLVGEHN 522
           CGC  YT KG +H  + +HN
Sbjct: 138 CGCNHYTLKGLIHHEMNDHN 157


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
           protein F40H6.5 protein.
          Length = 1288

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -3

Query: 534 TIDVVVFANQLVQGTLLCVGLATTTSHSTTPANHSGSHGVSRIKTSPSNP 385
           T+D     ++ V G L     +TTTS  TT A+ S +   S I +S  NP
Sbjct: 470 TVDCKDSKDEFVYGHLPSYAFSTTTSSMTTTASDSTTSDSSVIVSSSKNP 519


>U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical
           protein F01G12.1 protein.
          Length = 178

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 97  HTLINKLWFHFGSDSIVLIFVW 32
           HT+  K+WFH+G D +VL   W
Sbjct: 116 HTM--KMWFHWGFDEVVLFDFW 135


>L23110-1|AAA03544.1|  744|Caenorhabditis elegans BMP receptor
           protein.
          Length = 744

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 514 EHNHVNRGGRRAAKQSNPMINARASSPPTPLLLSRIRHLDIDNFDP 651
           +H H +   +R     NP  ++    PP P++L     L  DN +P
Sbjct: 638 QHYHASSPSKRQHPSPNPFFDSCPPPPPIPVILENGGILQPDNAEP 683


>AF047651-12|AAN63460.1|  592|Caenorhabditis elegans Abnormal dauer
           formation protein4, isoform c protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 514 EHNHVNRGGRRAAKQSNPMINARASSPPTPLLLSRIRHLDIDNFDP 651
           +H H +   +R     NP  ++    PP P++L     L  DN +P
Sbjct: 486 QHYHASSPSKRQHPSPNPFFDSCPPPPPIPVILENGGILQPDNAEP 531


>AF047651-10|AAC02726.1|  744|Caenorhabditis elegans Abnormal dauer
           formation protein4, isoform a protein.
          Length = 744

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 514 EHNHVNRGGRRAAKQSNPMINARASSPPTPLLLSRIRHLDIDNFDP 651
           +H H +   +R     NP  ++    PP P++L     L  DN +P
Sbjct: 638 QHYHASSPSKRQHPSPNPFFDSCPPPPPIPVILENGGILQPDNAEP 683


>Z83216-9|CAB05678.1|  111|Caenorhabditis elegans Hypothetical
           protein C08F11.11 protein.
          Length = 111

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
 Frame = -3

Query: 486 LCVGLATTTSHST------TPANHSGSHGVSRIKTSPSNPE 382
           L V   +T +HST      TP N S S+GV+  +T+P N E
Sbjct: 49  LTVKTDSTCNHSTYIMTKVTPPNESPSNGVAHCRTAPCNSE 89


>Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical
           protein F07B10.4 protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -2

Query: 178 KTSHFHIRIVLSVISFVIVRAIFIVIPHTLI 86
           KT  +HI++ +  +   +++A+F+V+P T I
Sbjct: 627 KTVKYHIQVTVLFLCSCVIQALFVVLPVTHI 657


>Z69663-1|CAA93511.1|  636|Caenorhabditis elegans Hypothetical
           protein K02B9.1 protein.
          Length = 636

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -3

Query: 540 APTIDVVVFANQLVQGTLLCVGLATTTSHSTTPANHSGSHGVSRIKTSPSNP 385
           AP +  +  + Q+ QG+   V +++  +HS T  NHS  +  + +   PS P
Sbjct: 313 APQLPNLSESFQMAQGSSQ-VTMSSRPAHSNTSMNHSSRNQYNHVDQRPSRP 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,148,286
Number of Sequences: 27780
Number of extensions: 408244
Number of successful extensions: 1195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)