Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_A20
(731 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.73
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.97
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 24 1.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.9
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 22 6.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 6.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 6.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 580 RASSPPTPLLLSRIRHLDIDN 642
R +SPPTPL +SR D D+
Sbjct: 1393 RLTSPPTPLSISRAGSRDEDS 1413
Score = 22.2 bits (45), Expect = 5.2
Identities = 16/62 (25%), Positives = 22/62 (35%)
Frame = -1
Query: 641 LSMSKCRILDSSNGVGGDDARAFIMGLDCFAARLPPRLTWLCSPTNLCKVPFCV*ALQPQ 462
L + K L + GG GLD RLP R + PF + + +
Sbjct: 356 LRVKKEEELQEAPSCGGGPTILTTPGLDSDGIRLPCREVEAAATARNVVAPFLIGSRRTS 415
Query: 461 PP 456
PP
Sbjct: 416 PP 417
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.6 bits (51), Expect = 0.97
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 208 NINISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLI 86
N +S R +++ H ++ +SF IV +I+I TL+
Sbjct: 388 NSEVSKSRTKESAWRHFAAIIEWLSFFIVIFTYIIILITLV 428
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 256 HELNLCIADCSTFTSRNINISSCRAIK 176
+E+N I +CS + +I++ S + IK
Sbjct: 95 NEVNKLITECSAISDADIHLKSSKLIK 121
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 392 EGEVFMRLTP*DPEWFAGVVLWEVV 466
E F + T W G+V WEV+
Sbjct: 808 EAIAFRKFTSASDVWSMGIVCWEVM 832
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 468 TTTSHSTTPANHSGSHGVSRIKTSPSNPEARASSGAH 358
TT + +TT SGS S + S+ E+ SSG +
Sbjct: 226 TTATMATTSTPGSGSLPASPADSGVSDVESSTSSGGN 262
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.8
Identities = 6/23 (26%), Positives = 14/23 (60%)
Frame = -2
Query: 265 IRNHELNLCIADCSTFTSRNINI 197
+ +E+N I +CS + N+++
Sbjct: 92 LNENEINQLITECSAISDTNVHL 114
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = +1
Query: 463 CGCKAYTQKGTLHKLVGEHNHVNRGGRRAAKQSNPMINARASSPP 597
CG Y +LH + ++++ A +S P + AS+ P
Sbjct: 25 CGRDTYALNQSLHFVRASLSNLDMSVLECADRSAPRVKKTASAGP 69
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = +1
Query: 463 CGCKAYTQKGTLHKLVGEHNHVNRGGRRAAKQSNPMINARASSPP 597
CG Y +LH + ++++ A +S P + AS+ P
Sbjct: 115 CGRDTYALNQSLHFVRASLSNLDMSVLECADRSAPRVKKTASAGP 159
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 483 CVGLATTTSHSTTPANHSGSHGVSRI 406
C GL TTT+H+ G +G+ +
Sbjct: 405 CNGLHTTTAHNRFLGGIGGYNGLPTV 430
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -2
Query: 430 RISWCEPHKNFALEPRGAGVLRGPLTAAQIH 338
R+ + PHK F G + GP+ H
Sbjct: 603 RMRYAAPHKAFTYRMHGYASVVGPVKGIYQH 633
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,168
Number of Sequences: 438
Number of extensions: 4969
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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