Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_A06
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006619-1|AAK68255.1|  241|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione S...    28   4.7  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical
           protein ZK742.2 protein.
          Length = 594

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 313 NADCVTFFFCFGKGTYRGVCAQLIFTRLVYDSIVRAEVSGAFCFLRV 173
           NADC  F+    +GT  G   Q I+T+  Y  I +A  +   C  ++
Sbjct: 427 NADCHRFWRSADEGTVAGKAQQSIYTQRQYTFIGKAPDNRKVCLAKM 473


>AC006619-1|AAK68255.1|  241|Caenorhabditis elegans Hypothetical
           protein C46C11.3 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 8/42 (19%), Positives = 25/42 (59%)
 Frame = -3

Query: 354 LCTWSLFYHGFVQRMQIVSRFSSVLVKVHTGVSVLSSSLHDW 229
           L  ++ ++H ++ +  + + +  V + +   + +LSSS+++W
Sbjct: 133 LAVYTFYHHRYMYKRAVAALYLVVAMCIFGAIEILSSSINEW 174


>Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.11 protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 104 KFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTF 277
           KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 38  KFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 104 KFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTF 277
           KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 38  KFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
           protein F54F11.2 protein.
          Length = 1589

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 107 FSGLQGCYIREFDGVLPFDSVTYSKEA 187
           F+ +  C + E+ G  P D  TY   A
Sbjct: 691 FTNMAQCVVNEYSGFCPLDKATYGSAA 717


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,972,482
Number of Sequences: 27780
Number of extensions: 210536
Number of successful extensions: 534
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)