Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P24
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063405-1|AAH63405.1|  137|Homo sapiens bolA homolog 1 (E. coli...   103   3e-22
AL591493-19|CAI12571.1|  137|Homo sapiens bolA homolog 1 (E. col...   103   3e-22
AF151901-1|AAD34138.1|  137|Homo sapiens CGI-143 protein protein.     103   3e-22
AF060511-1|AAG43129.1|   86|Homo sapiens My016 protein protein.        60   6e-09
BC130403-1|AAI30404.1|  124|Homo sapiens bolA homolog 2 (E. coli...    38   0.026
BC130401-1|AAI30402.1|  124|Homo sapiens bolA homolog 2 (E. coli...    38   0.026
BC062756-1|AAH62756.1|   58|Homo sapiens BOLA2 protein protein.        38   0.026
DQ225187-1|ABB04094.1|  107|Homo sapiens bolA-like 3 protein.          35   0.18 
AC073263-3|AAX93059.1|  107|Homo sapiens unknown protein.              35   0.18 
U71268-1|AAD00180.1|  575|Homo sapiens potential transcriptional...    31   2.9  
U71267-1|AAD00179.1|  642|Homo sapiens potential transcriptional...    31   2.9  

>BC063405-1|AAH63405.1|  137|Homo sapiens bolA homolog 1 (E. coli)
           protein.
          Length = 137

 Score =  103 bits (248), Expect = 3e-22
 Identities = 54/105 (51%), Positives = 70/105 (66%)
 Frame = -3

Query: 518 SSASGIVESTIXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKR 339
           S A G VE+ I  KL   L  + +++ NES  H VP G+ETHF+V VVS +F+GL  ++R
Sbjct: 26  SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85

Query: 338 HRLVNELLAEELQNGVHALSIVAKTPKQWEXSDQLXENSPNCRGG 204
           HRLV+  LAEEL   VHAL+I A+TP QW  + QL + SP C GG
Sbjct: 86  HRLVHAALAEELGGPVHALAIQARTPAQWRENSQL-DTSPPCLGG 129


>AL591493-19|CAI12571.1|  137|Homo sapiens bolA homolog 1 (E. coli)
           protein.
          Length = 137

 Score =  103 bits (248), Expect = 3e-22
 Identities = 54/105 (51%), Positives = 70/105 (66%)
 Frame = -3

Query: 518 SSASGIVESTIXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKR 339
           S A G VE+ I  KL   L  + +++ NES  H VP G+ETHF+V VVS +F+GL  ++R
Sbjct: 26  SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85

Query: 338 HRLVNELLAEELQNGVHALSIVAKTPKQWEXSDQLXENSPNCRGG 204
           HRLV+  LAEEL   VHAL+I A+TP QW  + QL + SP C GG
Sbjct: 86  HRLVHAALAEELGGPVHALAIQARTPAQWRENSQL-DTSPPCLGG 129


>AF151901-1|AAD34138.1|  137|Homo sapiens CGI-143 protein protein.
          Length = 137

 Score =  103 bits (248), Expect = 3e-22
 Identities = 54/105 (51%), Positives = 70/105 (66%)
 Frame = -3

Query: 518 SSASGIVESTIXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKR 339
           S A G VE+ I  KL   L  + +++ NES  H VP G+ETHF+V VVS +F+GL  ++R
Sbjct: 26  SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85

Query: 338 HRLVNELLAEELQNGVHALSIVAKTPKQWEXSDQLXENSPNCRGG 204
           HRLV+  LAEEL   VHAL+I A+TP QW  + QL + SP C GG
Sbjct: 86  HRLVHAALAEELGGPVHALAIQARTPAQWRENSQL-DTSPPCLGG 129


>AF060511-1|AAG43129.1|   86|Homo sapiens My016 protein protein.
          Length = 86

 Score = 60.1 bits (139), Expect = 6e-09
 Identities = 35/84 (41%), Positives = 48/84 (57%)
 Frame = -3

Query: 488 IXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAE 309
           +  KL   LE++HV+V + +            F+V+VVS KF+G PL++RHRLVN  LAE
Sbjct: 8   LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRLVNACLAE 62

Query: 308 ELQNGVHALSIVAKTPKQWEXSDQ 237
           EL + +HA      TP QW    Q
Sbjct: 63  ELPH-IHAFEQKTLTPDQWARERQ 85


>BC130403-1|AAI30404.1|  124|Homo sapiens bolA homolog 2 (E. coli)
           protein.
          Length = 124

 Score = 37.9 bits (84), Expect = 0.026
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = -3

Query: 488 IXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNE 321
           +  KL   LE++HV+V + +            F+V+VVS KF+G PL++RHR   E
Sbjct: 74  LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 124


>BC130401-1|AAI30402.1|  124|Homo sapiens bolA homolog 2 (E. coli)
           protein.
          Length = 124

 Score = 37.9 bits (84), Expect = 0.026
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = -3

Query: 488 IXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNE 321
           +  KL   LE++HV+V + +            F+V+VVS KF+G PL++RHR   E
Sbjct: 74  LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 124


>BC062756-1|AAH62756.1|   58|Homo sapiens BOLA2 protein protein.
          Length = 58

 Score = 37.9 bits (84), Expect = 0.026
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = -3

Query: 488 IXNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNE 321
           +  KL   LE++HV+V + +            F+V+VVS KF+G PL++RHR   E
Sbjct: 8   LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 58


>DQ225187-1|ABB04094.1|  107|Homo sapiens bolA-like 3 protein.
          Length = 107

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = -3

Query: 419 NVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSIVAKTPKQ 255
           ++  G    +++ + SE+F     +++H++VN+ L EE++  +H L I    PK+
Sbjct: 54  DISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKE-MHGLRIFTSVPKR 107


>AC073263-3|AAX93059.1|  107|Homo sapiens unknown protein.
          Length = 107

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = -3

Query: 419 NVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSIVAKTPKQ 255
           ++  G    +++ + SE+F     +++H++VN+ L EE++  +H L I    PK+
Sbjct: 54  DISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKE-MHGLRIFTSVPKR 107


>U71268-1|AAD00180.1|  575|Homo sapiens potential transcriptional
           repressor NOT4Hp protein.
          Length = 575

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 27  NHSSNNHLYTTQYNLHHTQPQIFSVILVNN*TIGLGLINY-VTSKAL 164
           NH +++H   +QY+   T  Q+ +++L+NN    LG   + VT KAL
Sbjct: 369 NHRASSHQKQSQYHPLQTGKQLLALVLLNNQRDDLGFDPFDVTRKAL 415


>U71267-1|AAD00179.1|  642|Homo sapiens potential transcriptional
           repressor NOT4Hp protein.
          Length = 642

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 27  NHSSNNHLYTTQYNLHHTQPQIFSVILVNN*TIGLGLINY-VTSKAL 164
           NH +++H   +QY+   T  Q+ +++L+NN    LG   + VT KAL
Sbjct: 369 NHRASSHQKQSQYHPLQTGKQLLALVLLNNQRDDLGFDPFDVTRKAL 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,858,914
Number of Sequences: 237096
Number of extensions: 1285351
Number of successful extensions: 2032
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)