Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P21
(338 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 110 9e-25
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 110 9e-25
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 110 9e-25
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 110 9e-25
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 110 9e-25
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 110 9e-25
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 108 5e-24
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 29 2.8
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 29 2.8
BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open readi... 28 6.4
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 9e-25
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 9e-25
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 110 bits (265), Expect = 9e-25
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 110 bits (265), Expect = 9e-25
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 9e-25
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 110 bits (265), Expect = 9e-25
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RMRHLKIV
Sbjct: 61 TGRMRHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 108 bits (259), Expect = 5e-24
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -2
Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 106 XXRMRHLKIV 77
RM HLKIV
Sbjct: 61 TGRMSHLKIV 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 RLYRRRFRNGFKEG-KPTPPKKAVASS 7
++ RRFR+GF+EG P P + AVA+S
Sbjct: 68 KIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 194 IKMRPMWISCSKITILPLVSEG*AQEDYW 108
IK RP W CSK LP V+E ++ W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 194 IKMRPMWISCSKITILPLVSEG*AQEDYW 108
IK RP W CSK LP V+E ++ W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205
>BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open reading
frame 182 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 194 IKMRPMWISCSKITILPLVSE 132
IK RP W CSK LP V+E
Sbjct: 253 IKRRPPWQICSKFGALPFVAE 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,119,821
Number of Sequences: 237096
Number of extensions: 940325
Number of successful extensions: 1797
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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