Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P21
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    93   5e-20
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    90   4e-19
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.21 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.28 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   1.5  
L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...    28   2.0  
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...    28   2.0  
U40939-1|AAA81700.1|  186|Caenorhabditis elegans Hypothetical pr...    27   2.6  
AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine re...    27   3.4  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 93.1 bits (221), Expect = 5e-20
 Identities = 39/70 (55%), Positives = 50/70 (71%)
 Frame = -2

Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 106 XXRMRHLKIV 77
             R RHL+ V
Sbjct: 61  TGRTRHLRDV 70


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 89.8 bits (213), Expect = 4e-19
 Identities = 38/70 (54%), Positives = 49/70 (70%)
 Frame = -2

Query: 286 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 107
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 106 XXRMRHLKIV 77
             R RHL+ V
Sbjct: 61  TGRTRHLRDV 70


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 268 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 161
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.28
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 268 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 161
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 255 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 148
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 319 DDLFRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 164
           ++++R+ + S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 29  NEVYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 319 DDLFRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 164
           ++++R+ + S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 36  NEVYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88


>U40939-1|AAA81700.1|  186|Caenorhabditis elegans Hypothetical
           protein F13D11.3 protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 27  WAALVSLL*NHYGSASCTIFK*RM-RPVPVVFLRLAFT 137
           W  ++       G+AS  +   RM RPVP V+LR  +T
Sbjct: 137 WRQMIDFEKQRNGNASVELISGRMARPVPSVYLRRVYT 174


>AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein68 protein.
          Length = 299

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +1

Query: 175 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPS 282
           H G +++F  +++++  F I+   +F  +  L+Y S
Sbjct: 77  HCGFVILFCYELSVFTHFAISINRFFAVWMPLKYES 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,999,087
Number of Sequences: 27780
Number of extensions: 151583
Number of successful extensions: 369
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)