Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P18
         (367 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   6.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   9.1  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 205 ICVSMICESYHPTVLE 252
           IC +++C + HP + E
Sbjct: 5   ICFALMCIACHPDIQE 20


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 237  SYRTGGWYDSQNEQ 278
            S   GGW DSQ ++
Sbjct: 1472 SLALGGWNDSQGDK 1485


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 180 QVPSHTTDNLCF 215
           QVP + TDNL +
Sbjct: 494 QVPKNATDNLTY 505


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 53  KKYNALFYLKLVKSARPLXSDAC 121
           K YN L + +     RP   D C
Sbjct: 91  KSYNLLIHERTHTDERPYSCDIC 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,450
Number of Sequences: 336
Number of extensions: 1787
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)