Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P18
(367 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 27 0.91
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 26 1.6
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 25 3.7
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ... 25 4.9
SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 25 4.9
SPAC57A10.04 |mug10||sequence orphan|Schizosaccharomyces pombe|c... 24 6.4
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 24 8.5
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 24 8.5
SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|c... 24 8.5
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 24 8.5
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 27.1 bits (57), Expect = 0.91
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 228 VIPSYRTGGWYDSQNEQTQILXYFXXHLSYDNFHKS 335
V+P+Y GGW+ +N I L +F KS
Sbjct: 575 VLPTYAKGGWFSFRNHFRNITLKVFRFLRSGSFKKS 610
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 1.6
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 248 STVGWYDSQIIETQIICGMTWNLRVFAAIFIDRWWTIYACVSYMRQRXGDERISLVLNKI 69
S GW +T I G+T N+R F + F DR+ + SY R G + + +
Sbjct: 14 SMAGWMFGA--DTGSIGGIT-NMRDFQSRFADRYNPVTDTYSYSSARQGLITGMVNVGSM 70
Query: 68 THCIFS 51
T CI S
Sbjct: 71 TGCILS 76
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 25.0 bits (52), Expect = 3.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 158 IDRWWTIYACVSYMRQRXGDERISLVLNKITHCIFSKYVPTDTR 27
I+R W + V G + +N+IT K PTDTR
Sbjct: 814 IERIWEVGPLVDKPEDHCGMTVFAAQMNEITDLEKDKLPPTDTR 857
>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 24.6 bits (51), Expect = 4.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 257 PSSSTVGWYDSQIIET 210
PS+S V W DS I+ET
Sbjct: 178 PSTSWVLWLDSDIVET 193
>SPAPB1A10.07c |||sphingolipid biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 24.6 bits (51), Expect = 4.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +1
Query: 202 IICVSMICESYHPTVLE 252
++C+++ C S HPT+ E
Sbjct: 241 LLCIAVSCLSVHPTIQE 257
>SPAC57A10.04 |mug10||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 338
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 154 SMNMAAKTRKFQVIPQIICVSMICESYHPTV-LEDGMTHRMNKHK 285
++NM K + PQ + S+ + YH + +G +++N+ K
Sbjct: 288 TLNMKGKLLNRHLAPQTMAASVFLKWYHERAGISNGKENKLNRLK 332
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 23.8 bits (49), Expect = 8.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 210 TDYLWYDLELACFCCHIH*QMVDNI 136
T LW+ + C CC H V +I
Sbjct: 331 TARLWHPVRKDCLCCFEHSDFVTSI 355
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 23.8 bits (49), Expect = 8.5
Identities = 9/51 (17%), Positives = 25/51 (49%)
Frame = +1
Query: 52 EKIQCVILFKTSEIRSSPXL*RMYDTQAYIVHHLSMNMAAKTRKFQVIPQI 204
E++ C I+ + ++ + ++ + I +H+ + A KF +P++
Sbjct: 694 ERLGCTIVLRGADYNQLSKVKKIVELVVLIAYHIKLECALLRDKFVNMPEL 744
>SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 23.8 bits (49), Expect = 8.5
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -3
Query: 245 TVGWYDSQIIETQIICGMTWNLRVFAAIFIDRWWTIY 135
++GW + Q + W L +F F W+T Y
Sbjct: 257 SMGWKKELLGLVQTLYKEYWVLLLFPMFFSSNWFTTY 293
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 23.8 bits (49), Expect = 8.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 186 PSHTTDNLCFY 218
P HT D++CFY
Sbjct: 116 PCHTRDSICFY 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,524,509
Number of Sequences: 5004
Number of extensions: 28858
Number of successful extensions: 77
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 114084208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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