Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P16
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +3

Query: 333 IVFIVGIIGITQFPVRPEFKFEKFVAKLSLVSNI--ISYV--KIRRHFAQSFKFILENFH 500
           +  +  ++GI QFP+   F F      L   S    +SY+     R  +  FK+I +   
Sbjct: 55  LTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAG 114

Query: 501 FSG 509
           ++G
Sbjct: 115 YTG 117


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +3

Query: 333 IVFIVGIIGITQFPVRPEFKFEKFVAKLSLVSNI--ISYV--KIRRHFAQSFKFILENFH 500
           +  +  ++GI QFP+   F F      L   S    +SY+     R  +  FK+I +   
Sbjct: 11  LTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAG 70

Query: 501 FSG 509
           ++G
Sbjct: 71  YTG 73


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 262 PKSCTKTIACGHNLIGLVG 206
           P +CT     G+  +GLVG
Sbjct: 141 PAACTPDSRVGYGSVGLVG 159


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 489 ENFHFSGSTDTLKENYSMMRK 551
           EN H    TDTLK+    ++K
Sbjct: 173 ENCHLKFVTDTLKKELEKLQK 193


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +3

Query: 492 NFHFSGSTDTLKENYSMMRKPSNANYQLN*FQN*TSDYTRVFNSI 626
           +FH   S+++ +   +   + SN++   N   N  +DYT  +  I
Sbjct: 479 SFHQFYSSESSQNQVAPTGENSNSSSDFNFLSNLANDYTPEYYQI 523


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +3

Query: 492 NFHFSGSTDTLKENYSMMRKPSNANYQLN*FQN*TSDYTRVFNSI 626
           +FH   S+++ +   +   + SN++   N   N  +DYT  +  I
Sbjct: 427 SFHQFYSSESSQNQVAPTGENSNSSSDFNFLSNLANDYTPEYYQI 471


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,854
Number of Sequences: 336
Number of extensions: 2907
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)