Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P16
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81108-3|CAB03239.1|  152|Caenorhabditis elegans Hypothetical pr...   209   2e-54
AF007861-1|AAB66721.1|  147|Caenorhabditis elegans ce-Mago protein.   207   5e-54
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    30   1.8  
AF043701-5|ABP57822.1|  166|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AL132898-2|CAC14413.1|  349|Caenorhabditis elegans Hypothetical ...    28   7.3  
AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical ...    27   9.6  
AC024090-4|AAK67221.1|  300|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z81108-3|CAB03239.1|  152|Caenorhabditis elegans Hypothetical
           protein R09B3.5 protein.
          Length = 152

 Score =  209 bits (510), Expect = 2e-54
 Identities = 96/129 (74%), Positives = 107/129 (82%)
 Frame = -1

Query: 458 STDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHPCVMDELK 279
           + DFY+RYYVGHKGKFGHEFLEFEFRP+G LRYANNSNYKNDTMIRKEA V   V+ ELK
Sbjct: 8   AADFYVRYYVGHKGKFGHEFLEFEFRPNGSLRYANNSNYKNDTMIRKEATVSESVLSELK 67

Query: 278 RIIIDSEIMHEDDRLWPQPDRVGRQELEIVIGEEHISFTTSKTGSLVDVNQSRDPEGLRG 99
           RII DSEIM EDD  WP+PD++GRQELEI+   EHISFTT K G+L DVN S+DP+GLR 
Sbjct: 68  RIIEDSEIMQEDDDNWPEPDKIGRQELEILYKNEHISFTTGKIGALADVNNSKDPDGLRS 127

Query: 98  FDD*VQDLK 72
           F   VQDLK
Sbjct: 128 FYYLVQDLK 136


>AF007861-1|AAB66721.1|  147|Caenorhabditis elegans ce-Mago protein.
          Length = 147

 Score =  207 bits (506), Expect = 5e-54
 Identities = 95/129 (73%), Positives = 106/129 (82%)
 Frame = -1

Query: 458 STDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHPCVMDELK 279
           + DFY+RYYVGHKGKFGHEFLEFEFRP+G LRY NNSNYKNDTMIRKEA V   V+ ELK
Sbjct: 3   AADFYVRYYVGHKGKFGHEFLEFEFRPNGSLRYGNNSNYKNDTMIRKEATVSESVLSELK 62

Query: 278 RIIIDSEIMHEDDRLWPQPDRVGRQELEIVIGEEHISFTTSKTGSLVDVNQSRDPEGLRG 99
           RII DSEIM EDD  WP+PD++GRQELEI+   EHISFTT K G+L DVN S+DP+GLR 
Sbjct: 63  RIIEDSEIMQEDDDNWPEPDKIGRQELEILYKNEHISFTTGKIGALADVNNSKDPDGLRS 122

Query: 98  FDD*VQDLK 72
           F   VQDLK
Sbjct: 123 FYYLVQDLK 131


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 603 NLKFNSEINLTDNLRLRVFSSLSNFLLVYQ 514
           N KF+ EI LTDN     FS  S  LL+Y+
Sbjct: 755 NKKFDEEIKLTDNNDFVQFSMRSESLLIYR 784


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 603 NLKFNSEINLTDNLRLRVFSSLSNFLLVYQ 514
           N KF+ EI LTDN     FS  S  LL+Y+
Sbjct: 755 NKKFDEEIKLTDNNDFVQFSMRSESLLIYR 784


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 603 NLKFNSEINLTDNLRLRVFSSLSNFLLVYQ 514
           N KF+ EI LTDN     FS  S  LL+Y+
Sbjct: 755 NKKFDEEIKLTDNNDFVQFSMRSESLLIYR 784


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 603 NLKFNSEINLTDNLRLRVFSSLSNFLLVYQ 514
           N KF+ EI LTDN     FS  S  LL+Y+
Sbjct: 755 NKKFDEEIKLTDNNDFVQFSMRSESLLIYR 784


>AF043701-5|ABP57822.1|  166|Caenorhabditis elegans Hypothetical
           protein K12C11.7 protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 357 GITQFPVRPEFKFEKFVAKLSLVSNIISYVKIRRHFAQSFKFILENF 497
           GI + P  PE      +A  SL    +  +   RHFA SF F L+NF
Sbjct: 74  GIWEIPEEPEPSPRGKLA--SLAPFTMESISSWRHFASSFLFFLQNF 118


>Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical
           protein T27D12.1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +3

Query: 303 VNIGFFTYHCIVFIVGIIGITQFPVRPEF--KFEKFVAKLSLVSNIISYVKI 452
           + +GF+ +  + F+ G      FPV   F  K+  F      VS++++YV++
Sbjct: 127 IRMGFYYFLAVRFLQGFAFAANFPVIGSFCAKWSYFKQNGLFVSSLVAYVQL 178


>AL132898-2|CAC14413.1|  349|Caenorhabditis elegans Hypothetical
           protein Y59A8B.3 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 293 LHKGEHRLLYVSLYRFYSWNYWHNAVSRQAG-IQIREIRGQTFPCVQHNIV 442
           + K + RL YV  +  Y + +    +      I+ R++  +  PCV H+I+
Sbjct: 131 IFKSKRRLFYVMFHYVYGFTFTLPLLIHPPDQIEARKMAKEALPCVPHSII 181


>AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical
           protein B0546.3 protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 236 LWPQPDRVGRQELEIVIGEEH 174
           L+PQP  V  + LE +IGEEH
Sbjct: 285 LFPQPGFVQFENLEHIIGEEH 305


>AC024090-4|AAK67221.1|  300|Caenorhabditis elegans Hypothetical
           protein C52E2.7 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
 Frame = +3

Query: 399 KFVAKLSL-VSNIISYVKIRRHFAQSFKFILENF---HF-SGSTDTLKENYSMMRKPSNA 563
           +F+A+  + + +II+   I+ + A+ F F   N    HF +GS  +LKE    M + +  
Sbjct: 176 EFLAECVIGLDDIIASNAIKTNIARPFSFSNLNLFLRHFINGSNPSLKEMNIAMEEGTFE 235

Query: 564 NYQ---LN*FQN*TSDYTRVF 617
           NY+   LN     TS+++R++
Sbjct: 236 NYEKVLLNGINYRTSNFSRIY 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,106,049
Number of Sequences: 27780
Number of extensions: 281774
Number of successful extensions: 720
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)