Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P12
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 201 9e-53
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 173 3e-44
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 161 9e-41
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 144 8e-36
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 126 3e-30
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 3e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 98 1e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 72 9e-14
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 1.9
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.6
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.4
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.4
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 5.9
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 5.9
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 25 7.8
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 201 bits (490), Expect = 9e-53
Identities = 91/124 (73%), Positives = 100/124 (80%)
Frame = -3
Query: 688 TGEXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 509
TGE G+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSM
Sbjct: 39 TGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSM 98
Query: 508 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKD 329
ANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T RIVI
Sbjct: 99 ANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDK 158
Query: 328 CGQI 317
CG +
Sbjct: 159 CGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 173 bits (420), Expect = 3e-44
Identities = 76/102 (74%), Positives = 87/102 (85%)
Frame = -3
Query: 688 TGEXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 509
TGE GFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSM
Sbjct: 64 TGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSM 123
Query: 508 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 383
ANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 124 ANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 161 bits (391), Expect = 9e-41
Identities = 75/115 (65%), Positives = 88/115 (76%)
Frame = -3
Query: 667 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 488
YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +T
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNT 110
Query: 487 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 323
NGSQFFITTV T LDG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 111 NGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 144 bits (350), Expect = 8e-36
Identities = 66/120 (55%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Frame = -3
Query: 670 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGA 494
GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG
Sbjct: 54 GYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGK 113
Query: 493 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 317
D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 114 DSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 126 bits (304), Expect = 3e-30
Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 667 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 491
Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +
Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 490 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 383
TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 97 TNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (271), Expect = 3e-26
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = -3
Query: 682 EXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMA 506
E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 505 NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 380
N+G +TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 545 NSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 97.9 bits (233), Expect = 1e-21
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -3
Query: 667 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 491
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 490 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 347
TNGSQFFI LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 71.7 bits (168), Expect = 9e-14
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 667 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGVLSMANAGAD 491
Y G+I HRV+P F++QGGD T G GG+SIYG F E L+ G++ MA +
Sbjct: 49 YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107
Query: 490 TNGSQFFITTVKTSWLDGRHVVFGNVV 410
N SQFFIT T +G+ +FG VV
Sbjct: 108 GNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -1
Query: 666 TRAPFSIVSSPISCYKEGTSPTITALGESPSTAISSRTRISP 541
+RA S++S I KE +P+ITA SP +A S + ISP
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISP 360
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 357 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 443
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 485 WFPVLHHHC 459
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 323 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 481
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 390 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 539
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 613 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 467
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 372 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 551
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 552 SSSNL 566
SSS++
Sbjct: 222 SSSSI 226
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 627 CYKEGTSPTITALGESPSTAISSRTRISPLSTLD 526
C G+SPT + SP++++SS + T D
Sbjct: 290 CRSNGSSPTSESALNSPASSVSSLPSLGASQTTD 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,739,628
Number of Sequences: 5004
Number of extensions: 57086
Number of successful extensions: 157
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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