Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P11
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.62 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.62 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.62 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 483 FSIIVHSFITYFNDFFLLI*SVFIIVGFQKI 391
           F  + H+FI  FND F+++ S  +   F ++
Sbjct: 218 FITLQHTFIWVFNDVFVMLLSTALAYRFTQV 248


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 483 FSIIVHSFITYFNDFFLLI*SVFIIVGFQKI 391
           F  + H+FI  FND F+++ S  +   F ++
Sbjct: 218 FITLQHTFIWVFNDVFVMLLSTALAYRFTQV 248


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 483 FSIIVHSFITYFNDFFLLI*SVFIIVGFQKI 391
           F  + H+FI  FND F+++ S  +   F ++
Sbjct: 218 FITLQHTFIWVFNDVFVMLLSTALAYRFTQV 248


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 146 IYCILICF*TVIGNISVYVKIY 211
           ++CI+I    VIGN+ V + I+
Sbjct: 73  VFCIIIMCLGVIGNVMVPIVIF 94


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 146 IYCILICF*TVIGNISVYVKIY 211
           ++CI+I    VIGN+ V + I+
Sbjct: 73  VFCIIIMCLGVIGNVMVPIVIF 94


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 136 SMGDGKFHYT*SYKRKTKQKDFPNGE*FARH 44
           S+G+G F+   + +   KQ+  P+G  +A H
Sbjct: 50  SVGEGSFYLPMNMQGFVKQQTAPHGPPYAPH 80


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +3

Query: 270 ICHKSQKYRNVNCLRINKPSQSC 338
           +C    KY  + C RI    Q C
Sbjct: 776 VCTCDAKYLEIKCKRIYNEKQCC 798


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 73  NLFALFSFYNFKYNEICHHPC 135
           N+F +  FYNF  N I    C
Sbjct: 416 NIFLITPFYNFNENTIHSKLC 436


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 92  PFITLSIMKFAITHAFEFIYCILIC 166
           PFI  ++     T+ F + + IL+C
Sbjct: 88  PFIIFTVHFLLCTYYFYYAFIILLC 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,382
Number of Sequences: 336
Number of extensions: 3719
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)