Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P10
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -1

Query: 237 EFSLSRFACTFNYMRISYIHSW 172
           +F++  F C  + + +  IH W
Sbjct: 273 QFNIEMFLCNMSLLTVIPIHVW 294



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 361 VLSCMNFVIDVASKDHF 311
           V+SC+NF + V  + +F
Sbjct: 648 VVSCINFPLGVLDRGNF 664


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 467 PRHGDVSAPLRLGASPVPRS 408
           P+H  + +P    +SP PRS
Sbjct: 277 PQHQVLQSPSSTSSSPEPRS 296


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 246 KRRSNIASNIQVTSMFYNFFYTK*SLEATSITKFIQ 353
           +RR  IA ++++T      ++    ++A   TKF +
Sbjct: 211 RRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTE 246


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 246 KRRSNIASNIQVTSMFYNFFYTK*SLEATSITKFIQ 353
           +RR  IA ++++T      ++    ++A   TKF +
Sbjct: 211 RRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTE 246


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 121 YYYYCNIKFNSE*NLYFVLIFVLLNLN 41
           YY   N+ +N+    Y+ L    LNL+
Sbjct: 40  YYLLTNLTYNNTNRKYYWLNVCCLNLS 66


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 246 KRRSNIASNIQVTSMFYNFFYTK*SLEATSITKFIQ 353
           +RR  IA ++++T      ++    ++A   TKF +
Sbjct: 211 RRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTE 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,583
Number of Sequences: 336
Number of extensions: 2298
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)