Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P09
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125201-1|AAI25202.1|  891|Homo sapiens SLFN5 protein protein.        31   5.0  
BC125200-1|AAI25201.1|  891|Homo sapiens schlafen family member ...    31   5.0  
AK054668-1|BAB70788.1|  782|Homo sapiens protein ( Homo sapiens ...    31   5.0  
AK024359-1|BAB14895.1|  156|Homo sapiens protein ( Homo sapiens ...    30   8.7  

>BC125201-1|AAI25202.1|  891|Homo sapiens SLFN5 protein protein.
          Length = 891

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 174 IAEELLSKVENKIHSFLYELLSDHIH*NTPVFVHKL-DDGSTLFFISDVKVISCKYH 341
           ++EEL S+V N + +  YELLS ++     +FVH L   G T+  +  ++ I   +H
Sbjct: 544 LSEELGSEVLNLLTNKQYELLSKNLRKTRELFVHGLPGSGKTILALRIMEKIRNVFH 600


>BC125200-1|AAI25201.1|  891|Homo sapiens schlafen family member 5
           protein.
          Length = 891

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 174 IAEELLSKVENKIHSFLYELLSDHIH*NTPVFVHKL-DDGSTLFFISDVKVISCKYH 341
           ++EEL S+V N + +  YELLS ++     +FVH L   G T+  +  ++ I   +H
Sbjct: 544 LSEELGSEVLNLLTNKQYELLSKNLRKTRELFVHGLPGSGKTILALRIMEKIRNVFH 600


>AK054668-1|BAB70788.1|  782|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30106 fis, clone BNGH41000190, weakly similar to
           Rattus norvegicus schlafen-4 (SLFN-4) mRNA. ).
          Length = 782

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 174 IAEELLSKVENKIHSFLYELLSDHIH*NTPVFVHKL-DDGSTLFFISDVKVISCKYH 341
           ++EEL S+V N + +  YELLS ++     +FVH L   G T+  +  ++ I   +H
Sbjct: 544 LSEELGSEVLNLLTNKQYELLSKNLRKTRELFVHGLPGSGKTILALRIMEKIRNVFH 600


>AK024359-1|BAB14895.1|  156|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14297 fis, clone PLACE1008941. ).
          Length = 156

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = -2

Query: 294 CFHRQAYERKLAYFNGYGRKAIRRESYEFCFQLYSEVLQQCSH 166
           C H++ YE K   F   GRK   + S  F F L SEVL    H
Sbjct: 60  CLHKEYYETKKVAFQQQGRK---QPSEMFRFVLKSEVLGLLGH 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,980,647
Number of Sequences: 237096
Number of extensions: 1592370
Number of successful extensions: 6522
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6522
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)