Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P07
(345 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 28 2.1
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 28 2.1
Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF003389-7|AAC71133.1| 96|Caenorhabditis elegans Bmp receptor ... 27 3.6
Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z81509-1|CAB04154.1| 332|Caenorhabditis elegans Hypothetical pr... 26 8.3
U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory recep... 26 8.3
AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative chem... 26 8.3
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 627 YENYNISPICVKQFLHFASQLT 648
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 695 YENYNISPICVKQFLHFASQLT 716
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 695 YENYNISPICVKQFLHFASQLT 716
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 695 YENYNISPICVKQFLHFASQLT 716
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 695 YENYNISPICVKQFLHFASQLT 716
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 695 YENYNISPICVKQFLHFASQLT 716
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 695 YENYNISPICVKQFLHFASQLT 716
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 253 YENYNISPICVKQFLHFASQLT 274
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 244 YEHFYCSALCVVSFIHFVSRST 309
YE++ S +CV F+HF S+ T
Sbjct: 275 YENYNISPICVKQFLHFASQLT 296
>Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical
protein ZK1307.7 protein.
Length = 436
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 242 HAKLHLGSSNKQCVATMAKVTSSPPPWMNYQCPKAHGSR 126
H K + G +K+C AT + + +M Y P G R
Sbjct: 354 HIKPYSGLGSKRCRATTVRYCDTGSGYMVYDAPNKKGER 392
>AF003389-7|AAC71133.1| 96|Caenorhabditis elegans Bmp receptor
associated proteinfamily protein 2 protein.
Length = 96
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 228 SRFFQQTVRRYHGESHFKPP-TMDELPVPKGSWQSHHDANQRRFNAVL 88
SRF Q+ H ++ PP T D +PVP S++ + Q +FN L
Sbjct: 13 SRFAQKRHGHGHHVANPGPPCTFDLMPVPFQSYKKVYGELQGKFNTYL 60
>Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical
protein T25E12.8 protein.
Length = 363
Score = 25.8 bits (54), Expect = 8.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 181 VTFAMVATHCLLEEPRCNL 237
+T A++ T+CL ++P C +
Sbjct: 34 ITVAVIVTYCLTKQPACEI 52
>Z81509-1|CAB04154.1| 332|Caenorhabditis elegans Hypothetical
protein F21A3.1 protein.
Length = 332
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 212 CWKNLDAIWRVTNIFIVALFV**VLYTLYHAVRTIKIGKTVQF 340
CWK+L W + N I ++ + Y ++ K GK QF
Sbjct: 131 CWKHLRRPWLILNYTICVVY----MIPTYLSIPDQKTGKAYQF 169
>U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory receptor
family protein 2 protein.
Length = 439
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Frame = -1
Query: 234 IASRFFQQ--TVRRY--HGESHFKPPTMDELPVPKGSWQSHHDAN---QRRFN 97
+A F+Q +RR H + P DE P+P+ S Q HD QR FN
Sbjct: 228 LAILFYQHCSVIRRSIKHLINEMVPAEQDECPLPESSLQKIHDCQISYQRIFN 280
>AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative
chemoreceptor GUR-2 protein.
Length = 427
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Frame = -1
Query: 234 IASRFFQQ--TVRRY--HGESHFKPPTMDELPVPKGSWQSHHDAN---QRRFN 97
+A F+Q +RR H + P DE P+P+ S Q HD QR FN
Sbjct: 216 LAILFYQHCSVIRRSIKHLINEMVPAEQDECPLPESSLQKIHDCQISYQRIFN 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,892,918
Number of Sequences: 27780
Number of extensions: 150471
Number of successful extensions: 430
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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