Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_P06
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.23 
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   3.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -3

Query: 373 HLYHRRERLHARGQRLRAPGGAIRAHGVPVRLHGAGRAE-AHGPSVD 236
           HL H +       +  RAP  A+RA G      GA RA+ A GP  D
Sbjct: 261 HLVHHK--CGGEEEAERAPAPAVRAAGDAAAARGAARADGAGGPLHD 305


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 469 LGGPGDQRRARVGDG 513
           LG PGD   A +G G
Sbjct: 149 LGSPGDASNASIGSG 163


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 469 LGGPGDQRRARVGDG 513
           LG PGD   A +G G
Sbjct: 305 LGSPGDASNASIGSG 319


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 322 APGGAIRAHGVPVRLHGAGRAEAHGPSVDP 233
           APGG  +   +      +  A A+GPS DP
Sbjct: 256 APGGDSQQAALNYSTLASAVASANGPSQDP 285


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 290 ACPASWRWTCRS 255
           A   +WRW C+S
Sbjct: 20  ALNGAWRWECKS 31


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 22  KLYITLNRYCNVILV 66
           K+   L RYC+V+LV
Sbjct: 68  KITTILQRYCSVLLV 82


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 22  KLYITLNRYCNVILV 66
           K+   L RYC+V+LV
Sbjct: 64  KITTILQRYCSVLLV 78


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 22  KLYITLNRYCNVILVQHL 75
           K  +  N+YCN I++ +L
Sbjct: 313 KTVLKTNKYCNFIILFYL 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,986
Number of Sequences: 336
Number of extensions: 2864
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)