Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P06
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 105 4e-23
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 102 3e-22
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 99 1e-21
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 69 4e-12
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 64 1e-10
11_01_0028 - 215821-215880,216114-216284 48 6e-06
01_04_0138 + 16554175-16554822 34 0.082
01_06_0039 + 25857805-25858894,25858997-25859345,25860019-258601... 31 0.77
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 30 1.3
09_04_0210 + 15644151-15644609 30 1.3
03_02_0778 - 11123820-11124242,11125196-11125201 30 1.3
01_06_1740 - 39575614-39576981 30 1.3
10_07_0104 - 12907816-12908301 30 1.8
12_02_0303 + 17106482-17107261 29 2.3
05_07_0198 - 28359092-28359457,28359574-28359729,28359844-283600... 29 2.3
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 29 2.3
12_02_0913 + 24246217-24247557 29 3.1
04_03_0073 - 10702352-10702619,10702702-10702836,10702915-10703594 29 3.1
01_06_0154 - 27049218-27049517,27049679-27050107 29 3.1
10_06_0136 - 11114409-11114576,11114656-11114784,11114873-111150... 29 4.1
05_04_0125 - 18241542-18242129 29 4.1
12_02_0403 - 18627246-18627557,18627904-18628836 28 5.4
10_06_0145 + 11215895-11216860 28 5.4
06_01_0754 - 5644310-5646292 28 5.4
06_01_0068 - 572964-573323 28 5.4
05_03_0118 - 8586731-8587220,8587331-8587846,8588842-8588906,858... 28 5.4
01_06_1487 - 37715421-37715942 28 5.4
01_06_0963 + 33441731-33442096,33442175-33442270 28 5.4
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 5.4
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562... 28 7.1
03_04_0087 - 17206053-17206175,17206543-17206677 28 7.1
02_02_0322 - 8938101-8938149,8938235-8938458,8938545-8938605,893... 28 7.1
01_01_1005 + 7968862-7969755 28 7.1
06_03_0405 - 20464701-20466287 27 9.4
05_07_0330 - 29318549-29318895,29320084-29320189,29320287-293206... 27 9.4
04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 27 9.4
01_06_1069 + 34275823-34276167 27 9.4
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 105 bits (251), Expect = 4e-23
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -1
Query: 420 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 241
G+ VDCS + +P + FTI GN F L+ Y+L+V + T C+SGF A+D+P P GPL
Sbjct: 432 GESSVDCSSLASMPDIAFTIGGNKFVLKPEQYILKVGEGTATQCISGFTAMDIPPPRGPL 491
Query: 240 WILGDVFIGKYYTEFDAGNRQLGF 169
WILGDVF+G Y+T FD GN ++GF
Sbjct: 492 WILGDVFMGAYHTVFDYGNLKVGF 515
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 102 bits (244), Expect = 3e-22
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -1
Query: 420 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 241
G+ V C I +P + FTIA F L Y++++ Q G TVC+SGFMA D+P P GPL
Sbjct: 409 GESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPL 468
Query: 240 WILGDVFIGKYYTEFDAGNRQLGF 169
WILGDVF+G Y+T FD G ++GF
Sbjct: 469 WILGDVFMGAYHTVFDFGKDRIGF 492
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = -1
Query: 633 DPAXYRGDLVRVPLLRDTYWEFHMDSVNVN--ASRFCAQGCSAIADTGTSLIAGPSKEVE 460
DP Y+GD VP+ R YW+F+M + ++ ++ FCA+GC+AI D+GTSL+AGP+ V
Sbjct: 237 DPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVA 296
Query: 459 ALNAAVGATAI 427
+N A+GA I
Sbjct: 297 QVNHAIGAEGI 307
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 99 bits (238), Expect = 1e-21
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -1
Query: 420 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 241
G+ VDC + +P ++FTI G F L+ +Y+L+V + C+SGF A+D+P P GPL
Sbjct: 422 GESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPL 481
Query: 240 WILGDVFIGKYYTEFDAGNRQLGF 169
WILGDVF+G Y+T FD G ++GF
Sbjct: 482 WILGDVFMGAYHTVFDYGKMRVGF 505
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = -1
Query: 633 DPAXYRGDLVRVPLLRDTYWEFHMDSVNVNASR--FCAQGCSAIADTGTSLIAGPSKEVE 460
DP+ Y+G+ VP+ + YW+F M V + FCA GCSAIAD+GTSL+AGP+ +
Sbjct: 245 DPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIIT 304
Query: 459 ALNAAVGATAI 427
+N +GAT +
Sbjct: 305 EINEKIGATGV 315
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = -1
Query: 633 DPAXYRGDLVRVPLLRDTYWEFHMDSVNVN--ASRFCAQGCSAIADTGTSLIAGPSKEVE 460
DP Y+G VP+ R YW+F M + ++ ++ FC+ GC+AIAD+GTSL+ GP+ V
Sbjct: 236 DPNHYKGSHTYVPVTRKGYWQFEMGDLLIDDYSTGFCSGGCAAIADSGTSLLGGPTTIVA 295
Query: 459 ALNAAVGATAI 427
+N A+GA I
Sbjct: 296 QINHAIGAEGI 306
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 16/71 (22%)
Frame = -1
Query: 333 NDYVLRVAQFGHTVCLSGFMALDVPKPMGPLW----------------ILGDVFIGKYYT 202
+ YV+++ Q G TVC+SGFMA DVP P GPLW ILGDVF+ Y+T
Sbjct: 397 DQYVVKLEQQGQTVCISGFMAFDVPPPRGPLWYTNYTVIKKRELHVVRILGDVFMAAYHT 456
Query: 201 EFDAGNRQLGF 169
FD G ++GF
Sbjct: 457 VFDFGKNRIGF 467
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = -1
Query: 636 SDPAXYRGDLVRVPLLRDTYWEFHMDS--VNVNASRFCAQGCSAIADTGTSLIAGPSKEV 463
+D + Y+GD + R YW+F M + ++ C GC+ IAD+GTSLIAGP +
Sbjct: 298 ADESHYKGDHTYTRVTRKAYWQFEMGDFLIGGRSTGICVDGCAVIADSGTSLIAGPIAAI 357
Query: 462 EALNAAVGATAIA 424
++A +GAT +A
Sbjct: 358 AQIHAHIGATGVA 370
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 468 EVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTL 340
++E N G G YV DC I HLP V F+I G F L
Sbjct: 459 KLEYANQLCGNMPSPVGSYV-DCRHIGHLPNVAFSIGGRAFEL 500
>11_01_0028 - 215821-215880,216114-216284
Length = 76
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = -1
Query: 633 DPAXYRGDLVRVPLLRDTYWEFHMDSV--NVNASRFCAQGCSAIADTGTSLIAGPSKEVE 460
DP ++GD V + R YW+F+ + + +++ F A+GC+AI D+ TSL+ P+ V
Sbjct: 2 DPKHFKGDHTYVHVSRKGYWQFNTRDLLTDGHSTGFYAKGCAAIVDSRTSLLTDPTAIVA 61
Query: 459 ALNAAVGATAI 427
+N A A I
Sbjct: 62 QVNHATEAEGI 72
>01_04_0138 + 16554175-16554822
Length = 215
Score = 34.3 bits (75), Expect = 0.082
Identities = 40/124 (32%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Frame = +1
Query: 157 HGGREPELAVPRVELRVVLADE-HV---PQDPQRAHGLRHVQRHEAGQAHRVPELR--HP 318
HG P+ P LR +A H P PQRA H QR AG R
Sbjct: 13 HGMDGPDRPKPIGRLRRAVAGHGHSRGWPDRPQRAAARSHQQRRGAGGTGSSGAQRGKRR 72
Query: 319 EHVVVALEREVVP---GDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQ 489
E EREV G G G+S + R AA+H RG+ RR G
Sbjct: 73 EETEAVREREVAELTEGHGDGESSRRREAAALHRSTMR---RGSRRRKAAIGRRTGKSGT 129
Query: 490 RRAR 501
RR+R
Sbjct: 130 RRSR 133
>01_06_0039 +
25857805-25858894,25858997-25859345,25860019-25860104,
25860242-25860399,25861489-25861565,25861656-25861722
Length = 608
Score = 31.1 bits (67), Expect = 0.77
Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 4/111 (3%)
Frame = +1
Query: 217 DEHVPQDPQRAHGLRHVQRHEAGQAHRVPELRHPEHVVVALEREVVPGDGKGDSRQVRYE 396
DEH + P+ H+A + H V V G G G + V +
Sbjct: 286 DEHSARPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSGLPVFSGGGGGGALDVGAK 345
Query: 397 AAVHDV----LPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEA 537
+H V LP+ +G G G LGG G G G+ G EA
Sbjct: 346 E-IHMVIPADLPQNNGSGKEHEEYGAVALGGGGGGENFSFGGGKTVDGAEA 395
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +1
Query: 214 ADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELRHPEHVVVALEREVVPGDGKGDSRQV-- 387
A E + +RAH RH H+A + H+ H H V+ + + P + V
Sbjct: 684 AQERARRRHKRAHSHRHSHHHDAHKRHKTELAGHRRHHVLHIHDDDDPVAAAAAAEHVIL 743
Query: 388 ----RYEAAVHDVLPEGDGRGAHRRVEG 459
R+EAA+ +G HRR G
Sbjct: 744 RRHGRHEAALGVQHRDGLKLNKHRRHGG 771
>09_04_0210 + 15644151-15644609
Length = 152
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 364 HRRERLHARGQRLRAPGGAIRAHGVPVRLHGAGRAEAHGPS 242
H+ ER A+ R R A+RAHG P GAG A P+
Sbjct: 56 HKYERSLAK--RRREIAAALRAHGAPPAADGAGAARYSSPA 94
>03_02_0778 - 11123820-11124242,11125196-11125201
Length = 142
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 246 GPWASARPAP*SRTGTPCARI 308
GPWA+ARP P G PC +
Sbjct: 9 GPWAAARPEPPPPKGRPCGPV 29
>01_06_1740 - 39575614-39576981
Length = 455
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 229 PQDPQRAHGLRH-VQRHEAGQAHRVPELRHPEHVVVALEREVVPGDG 366
P+ RA G R A Q H P+ R E +V + V PGDG
Sbjct: 11 PRSRARASGTAAPTTRGPAPQTHAPPQERRQEEIVHGVRHAVAPGDG 57
>10_07_0104 - 12907816-12908301
Length = 161
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 314 WRNSGTRCACPASWRWTCR 258
WR S + C CPA+ RW+ R
Sbjct: 124 WRRSASGCRCPAARRWSGR 142
>12_02_0303 + 17106482-17107261
Length = 259
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 163 GREPELAVPRVELRVVLADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELRHPEHVVVALE 342
G LAV V +R+V+ + P+R+H L H+ R + H LR P V AL+
Sbjct: 8 GHPLHLAVAAVYVRLVVDNLTTTASPRRSHRLLHLLR--LRRHHDYRRLRFPGAVAAALD 65
>05_07_0198 -
28359092-28359457,28359574-28359729,28359844-28360011,
28360082-28360206,28360288-28360405,28360491-28360718,
28360959-28361099,28361433-28361498,28361770-28361862,
28361965-28362225
Length = 573
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 419 PKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQKRLALT 550
PK +A A AA +A T+ PA PVS A P A +R A+T
Sbjct: 12 PKTLAAAAAAAPKAPTA---PAAVSFPVSHAACAPLAARRRAVT 52
>03_06_0222 +
32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/100 (27%), Positives = 41/100 (41%)
Frame = -1
Query: 492 SLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRV 313
SLI S ++A +A G+ + + P + TF GN+FT+ D VL
Sbjct: 696 SLICQLSTSLDASSAVNSVLTTGAGEDIANTK--PAIS--TFEDDGNNFTVSKLDIVLGG 751
Query: 312 AQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFD 193
++ + K G W L D+ +G Y EFD
Sbjct: 752 SETKSVQLEVTPKVEGILKLHGIRWTLSDLLVGYQYFEFD 791
>12_02_0913 + 24246217-24247557
Length = 446
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 558 SVNVNASRFC--AQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFG 418
+ N + FC A GCS IA G ++AG + EA G +AFG
Sbjct: 153 AANDDIIHFCDLAAGCSVIAGYGAGVVAG-TLGTEAFAFQSGTAELAFG 200
>04_03_0073 - 10702352-10702619,10702702-10702836,10702915-10703594
Length = 360
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/105 (26%), Positives = 44/105 (41%)
Frame = +1
Query: 211 LADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELRHPEHVVVALEREVVPGDGKGDSRQVR 390
L + V P A G R +RH + + R + RH + V L+ + G++R
Sbjct: 15 LIEIRVTARPTTAPGGRPPKRHASAPSARPAQDRHAQSYDVQLQYDT----DFGENRTEA 70
Query: 391 YEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAAL 525
A+H+ P R AH + L P + R R G +A+L
Sbjct: 71 DSKAIHEPPPMKKSRKAHSSPQRI-TLDKPKAKGRGRGGKVQASL 114
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +2
Query: 254 GFGTSSAMKPDRHTVCPNCATRST*SLPSSVKSFPAMVKVTRGRCGMRLQSTTYCPKAMA 433
G G ++A P R C NC T ST ++ P K CG+R + A A
Sbjct: 112 GAGAAAASAPRR---CANCDTTST----PLWRNGPRGPKSLCNACGIRYKKEERRAAAAA 164
Query: 434 VAPTA 448
VAPTA
Sbjct: 165 VAPTA 169
>10_06_0136 -
11114409-11114576,11114656-11114784,11114873-11115016,
11115130-11115299,11116441-11116528,11116590-11116652,
11116678-11116799,11118506-11118671
Length = 349
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 LPMNTSPRIHRGPMGFGTSSAMKPDRHT 295
LP++ SPR HR P T+ PD H+
Sbjct: 26 LPVSPSPRHHRRPHSTATACRAAPDLHS 53
>05_04_0125 - 18241542-18242129
Length = 195
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 424 GDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAAL--GTEAASVD 549
GDGRG RR G +GG G R + G+G A G SVD
Sbjct: 113 GDGRGGRRRRRG---VGGSGGSRGSGHGEGGGAQQPGRRQRSVD 153
>12_02_0403 - 18627246-18627557,18627904-18628836
Length = 414
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 281 ASWRWTCRSPWALCGSWG 228
ASWR PW+LC +WG
Sbjct: 218 ASWRAVGVPPWSLCIAWG 235
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 356 PAMVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQK 535
P +VK G C + STT A V+ T + + TS A + P + P +
Sbjct: 229 PRVVKTEPGCCSVSEASTTTTADAADVSSTGSSPSPTS-SNQAATATPPAPRPPPPLPET 287
Query: 536 RLALTLTESMWN 571
L TE+ W+
Sbjct: 288 IQQLDFTEAPWD 299
>06_01_0754 - 5644310-5646292
Length = 660
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 442 HRRVEGFHLLGGPGDQRRARVGD-GRAALGTEAASVDIDRVHVELPVRVPE 591
HR V+ ++L G GD AR+GD G A L A+ RV L PE
Sbjct: 452 HRDVKANNVLLGAGDTGAARLGDFGLARLYEHGATPATTRVAGTLGYMAPE 502
>06_01_0068 - 572964-573323
Length = 119
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -3
Query: 364 HRRERLHAR---GQRLRAPGGAIRAHGVPVRLHGAGR 263
HRR R R G+ RAPGG + AH + G GR
Sbjct: 46 HRRSRGRRRQHGGEGRRAPGGGVAAHVADEVVDGDGR 82
>05_03_0118 -
8586731-8587220,8587331-8587846,8588842-8588906,
8589483-8589989
Length = 525
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 325 RAPGGAIRAHGVPVRLHGAGRAEAHG 248
RA GG R G+ R H GR E HG
Sbjct: 285 RARGGGARGRGLGPRAHFDGRFEPHG 310
>01_06_1487 - 37715421-37715942
Length = 173
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +1
Query: 343 REVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGR 516
R ++ G+G G +V H+ PE DGR HR V G G +RR R D R
Sbjct: 34 RRMLGGEG-GARGEVEIPTEEHEDEPEPDGRRGHRPVVSD---GHRGRRRRCRNSDLR 87
>01_06_0963 + 33441731-33442096,33442175-33442270
Length = 153
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 408 VDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGH 298
VDC P P + L G ++ LR +QFG+
Sbjct: 89 VDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQFGN 125
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 409 DVLPEGD-GRGAHRRVEGFHLLGGPGDQR 492
D+LPEG GRG R ++G++L+ D+R
Sbjct: 383 DILPEGHPGRGRSRVMKGWYLIYSSTDER 411
>04_04_1577 +
34554819-34554995,34555672-34555754,34555906-34556229,
34556347-34556602,34556951-34557031,34557106-34557213,
34557300-34557329,34557475-34557612,34557737-34557774,
34557858-34557957,34558194-34558268
Length = 469
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 606 VRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 427
+R LLR + W + N A+R + ++ A G + P ++ L A+ AI
Sbjct: 14 LRDALLRGSAWR-GAPAANSAAARLASTASASEAAAGPKKVPPPPRKGRLLTGAMIGLAI 72
Query: 426 AFGQYV 409
A G YV
Sbjct: 73 AGGAYV 78
>03_04_0087 - 17206053-17206175,17206543-17206677
Length = 85
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 151 GSHGG-REPELA--VPRVELRVVLADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELRHPE 321
G HGG ++P V +VE R V A+ P +PQ HGL V GQA R
Sbjct: 19 GVHGGVKQPTGCGVVGQVEPRRVAAEP--PVEPQARHGLPTVPWAARGQARHDTNCRPCR 76
Query: 322 HVVVALER 345
++AL R
Sbjct: 77 AGLIALGR 84
>02_02_0322 -
8938101-8938149,8938235-8938458,8938545-8938605,
8938724-8940761,8940797-8940908,8942037-8942047,
8942293-8942443
Length = 881
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 277 EAGQAHRVPELRHPEHVVVALEREVVPGDGKGDSRQVRYE 396
EA + RVP L +H + +VV G GKG SR R E
Sbjct: 624 EAEVSTRVPSLHLRDHFGYSPSEKVVDGSGKG-SRSTRSE 662
>01_01_1005 + 7968862-7969755
Length = 297
Score = 27.9 bits (59), Expect = 7.1
Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Frame = +1
Query: 178 LAVPRVELRVVLADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELRHPEHVVVA------- 336
L VP R LA + + Q G +Q EA + P+L P H +A
Sbjct: 94 LEVPAARARWQLAADRERDEAQLTVGDAEIQGEEAVREIHPPDLLGPHHHAIAAPWTVAR 153
Query: 337 --LEREVVPGD-GKGDSRQVRYEAAVHDVLPEGDGRGAHRRV---------EGFHLLGGP 480
+E +V PG G+G Q A + GD G R +G +G
Sbjct: 154 RVVELQVAPGSRGRGVQEQRGVVGADDRGVEIGDEVGVARDAGEAGVAGVEDGEAGVGEA 213
Query: 481 GDQRRARVGDGRAALGTEAASV 546
G RARV D LG +A +V
Sbjct: 214 GGLVRARVAD-EVRLGEQAMAV 234
>06_03_0405 - 20464701-20466287
Length = 528
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 387 HLPRVTFTIAGNDFTLEGNDYVL--RVAQFGHTVCLSGFMALDVPKPMGPLWILGDVFIG 214
H RV G+D+ EG Y R+ +F V LSG ++ V G W+ +G
Sbjct: 103 HRVRVRARSGGHDY--EGLSYRAEGRLERFA-VVDLSGMRSVRVDAARGTAWVQSGATLG 159
Query: 213 KYYTEFDAGNRQLGF 169
+ Y + +LGF
Sbjct: 160 ELYHAIWSSAPRLGF 174
>05_07_0330 -
29318549-29318895,29320084-29320189,29320287-29320613,
29320714-29321271
Length = 445
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 558 SVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA 424
SV + S + A+ GTSL+AGP+ + L AA A A A
Sbjct: 59 SVASDCSSVASADFEGFAELGTSLLAGPAVLFDDLTAASVAVAEA 103
>04_04_0555 -
26210346-26211458,26211530-26211719,26211826-26211960,
26212072-26212169,26212262-26212425,26213558-26214032
Length = 724
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 481 GDQRRARVGDGRAALGTEAASVDIDRVHVELPV 579
GD+ DG AA EAA+ ++RV + PV
Sbjct: 37 GDRATGPSRDGAAAAAEEAAAPSVERVFADRPV 69
>01_06_1069 + 34275823-34276167
Length = 114
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +1
Query: 358 GDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEA 537
G+G G+ R+VR VH +GDG G G GG G A V A
Sbjct: 21 GEGDGEGRRVRRRPMVHAGGGDGDGGGDG---VGRGREGGCGGPYAAMVRGSTATAAVSL 77
Query: 538 ASVDIDRV 561
S + R+
Sbjct: 78 RSAPLGRI 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,657,329
Number of Sequences: 37544
Number of extensions: 397470
Number of successful extensions: 1699
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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