Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P05
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 35 0.041
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 34 0.096
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 34 0.096
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 34 0.096
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical pr... 30 1.2
U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 29 2.7
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 29 2.7
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 29 3.6
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 28 4.8
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 28 4.8
AL031627-21|CAA20970.1| 326|Caenorhabditis elegans Hypothetical... 28 4.8
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 28 4.8
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 28 6.3
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 28 6.3
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 27 8.3
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical ... 27 8.3
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 35.1 bits (77), Expect = 0.041
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = -2
Query: 558 TTSTSAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCK---LTDKSMELH 388
T+S P K+ +K + D K K V+ K+ ++ +EQ+Y K D+ ++
Sbjct: 5 TSSEDVPENKQKSLKFEII--DARMKIFKDIVKSKSSESVKEEQIYQKSLEFFDEDLKSS 62
Query: 387 VDNLENKDYLLVINKLLEPINVAD 316
+++ N++ K LEP+NV D
Sbjct: 63 EESVSNEEIKTGSEKELEPLNVFD 86
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 33.9 bits (74), Expect = 0.096
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = -2
Query: 408 DKSMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 229
+K+ + + E K L+ +N LE + D ++ DK+ L + + E+
Sbjct: 113 EKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRKLKDKLAK-LESEQDIFIENAVNEV 171
Query: 228 EKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQR 64
EKK E + N+RL AE +K Q+ I+ + E+ + +++R + A +Q+
Sbjct: 172 EKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQK 228
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 33.9 bits (74), Expect = 0.096
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = -2
Query: 408 DKSMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 229
+K+ + + E K L+ +N LE + D ++ DK+ L + + E+
Sbjct: 113 EKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRKLKDKLAK-LESEQDIFIENAVNEV 171
Query: 228 EKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQR 64
EKK E + N+RL AE +K Q+ I+ + E+ + +++R + A +Q+
Sbjct: 172 EKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQK 228
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 33.9 bits (74), Expect = 0.096
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = -2
Query: 408 DKSMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 229
+K+ + + E K L+ +N LE + D ++ DK+ L + + E+
Sbjct: 113 EKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRKLKDKLAK-LESEQDIFIENAVNEV 171
Query: 228 EKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQR 64
EKK E + N+RL AE +K Q+ I+ + E+ + +++R + A +Q+
Sbjct: 172 EKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQK 228
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = -2
Query: 405 KSMELHVDNLENKDYLLVINKLLEPINV-ADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 229
+S++ + + +DY++V N+ P D + + V + + N + E
Sbjct: 228 ESIKTLKEKVAGQDYIVVCNEKPAPFTAETDDFCSLQKENVHCTILRINHKEV-AEKNEE 286
Query: 228 EKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISK 88
+KK E+ + K E +KK+ + K E ++E K + K
Sbjct: 287 DKKEEEPKKEEEKKEEVEKKEEDEKKDEEPKKEEEKKEEEQKEEVEK 333
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -2
Query: 234 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKT 55
E+EKK ED++ + E +KK+ + K E D+E K+ K E +++K+
Sbjct: 302 EVEKKEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKK--EEEEKKED 359
Query: 54 DI 49
++
Sbjct: 360 EV 361
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 234 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKT 55
E EKK E+Q+ K E +KKD + K E +DE++ K + + KK
Sbjct: 319 EEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEVEEKSEKVEEKELEPKKD 378
Query: 54 D 52
+
Sbjct: 379 E 379
>Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical
protein DH11.2 protein.
Length = 411
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -2
Query: 576 EVSPIPTTSTSAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSM 397
++ +P V K +L YGWDQ + FV TL + YC L D
Sbjct: 21 DLPQLPDEIIEIIVSKVLPTELVAYGWDQVSRSFGTFVH----RTLCSKVYYCALHDPVW 76
Query: 396 ELH 388
EL+
Sbjct: 77 ELY 79
>U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical
protein C05D11.9 protein.
Length = 752
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = -2
Query: 330 INVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKK--FEDQRNNRLKPAETDKKDPQD 157
++V+DS ++ D VI L +P TTW T ++ K ++ N R++ ++ K+ ++
Sbjct: 297 LSVSDSVFQSSRDGEVINLLIEDPRTTWDRKTVLKHKKVNKEADNERIRVSKFWNKEFRE 356
Query: 156 SIMSLMKNMYET 121
M++ K M ++
Sbjct: 357 --MAIEKRMADS 366
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -2
Query: 216 EDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKTDI 49
+D + N K + KK ++ K + E G DE + K W ++ +KT +
Sbjct: 1205 DDDKENGAKRQKNTKKVHTTEVVLEKKTLVEHGFDEWMGFLKKKWRVQRKERKTQL 1260
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 264 NPNTTWSHMTEIEKKFEDQRNNRLKPAETD--KKDPQDSIMSLMKNMYETGDDEMKRMIS 91
N T +++ + K E RNNRL D KK +D+I + + + ++E + +
Sbjct: 779 NQETLEKKLSDWQAKLEAVRNNRLAERAEDRKKKRKEDAIQAKIAEERKKREEEERARLQ 838
Query: 90 KAWYEGQQRKKTD 52
EGQ+R+ D
Sbjct: 839 V--IEGQRRQHND 849
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Frame = +2
Query: 95 IILFISSSPVSYIFFMRLIMESCGSFLSVS---AGFKRL-----LRWSSNFFSISV 238
IILFI SS +S F+ +I +F+ S +GF + L +SSNFFS+++
Sbjct: 82 IILFIHSSIISLRVFVYIISSLASAFIIDSRTLSGFYFIQPSLYLDYSSNFFSVAI 137
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = -2
Query: 234 EIEKKFEDQRNNRLKPAETDKK----DPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQ 67
E+ D R N LK + K DP+ + ++ N YE GD + + K
Sbjct: 15 EVGISITDARGNSLKAQQIAGKERNLDPEADDLEVVVNFYEAGDGTFQLQLPKLTAVKPV 74
Query: 66 RKKTDIMD 43
K D++D
Sbjct: 75 DKVNDVLD 82
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -2
Query: 522 QVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYC--KLTDKSMELHVDNLENKDYLLVI 349
QV + W + + K +V+L N H + ++ V C K T ++ N++NK+ + ++
Sbjct: 420 QVDRSRLAWKKVLHYKKRYVQLTNTHLIWQKDVQCAPKGTVPLSDIKFVNVDNKNIITIV 479
Query: 348 NKLLE 334
+ ++
Sbjct: 480 CETMQ 484
>AL031627-21|CAA20970.1| 326|Caenorhabditis elegans Hypothetical
protein Y102A5C.33 protein.
Length = 326
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 435 LVVYEHSLVQQIP*QIYP--TGPNHIHSI*LDTSFALELMYLLWVLVILPWASKFPFL 602
+ ++E+ +Q I ++ T P + S D SFAL L+ + ++ PW + +L
Sbjct: 226 IYIHEYMFIQSIMVLLFKIVTAPFWVESFNSDLSFALPLIMSITDVITTPWLIQLSYL 283
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -2
Query: 522 QVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYC--KLTDKSMELHVDNLENKDYLLVI 349
QV + W + + K +V+L N H + ++ V C K T ++ N++NK+ + ++
Sbjct: 420 QVDRSRLAWKKVLHYKKRYVQLTNTHLIWQKDVQCAPKGTVPLSDIKFVNVDNKNIITIV 479
Query: 348 NKLLE 334
+ ++
Sbjct: 480 CETMQ 484
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 234 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNM--YETGDDEMKRMISKAWYEGQQRK 61
EIEK+ E ++ L+P + DSI S M+ M + +D M K Y + +
Sbjct: 470 EIEKENEIRKRTTLQPQQRQPSSRHDSINSAMEEMSLQQFLEDTMGEEFGKTQYSESRAE 529
Query: 60 KTDI 49
+I
Sbjct: 530 SRNI 533
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 279 FLAKSNPNTTWSHMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYET 121
F+ N+TWSH + +K + KP + K ++ M +KNMY T
Sbjct: 332 FVRPERFNSTWSHWSRAAQKKPIYLDGYEKPILRELKTISNNGMFHLKNMYLT 384
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 234 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNM--YETGDDEMKRMISKAWYEGQQRK 61
EIEK+ E ++ L+P + DSI S M+ M + +D M K Y + +
Sbjct: 470 EIEKENEIRKRTTLQPQQRQPSSRHDSINSAMEEMSLQQFLEDTMGEEFGKTQYSESRAE 529
Query: 60 KTDI 49
+I
Sbjct: 530 SRNI 533
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 234 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNM--YETGDDEMKRMISKAWYEGQQRK 61
EIEK+ E ++ L+P + DSI S M+ M + +D M K Y + +
Sbjct: 470 EIEKENEIRKRTTLQPQQRQPSSRHDSINSAMEEMSLQQFLEDTMGEEFGKTQYSESRAE 529
Query: 60 KTDI 49
+I
Sbjct: 530 SRNI 533
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +2
Query: 107 ISSSPVSYIFFMRLIMESCGSFLSVSAGFKRL-----LRWSSNFFSISVI*DHVVFGLDF 271
+ S P + +F+M L M SFL+V + FK + L+ SS FF V D + + F
Sbjct: 197 LRSVPDTNLFYMSLAMFGIDSFLAVLSTFKAIIFLLELKNSSEFFERLV--DWIDLLVPF 254
Query: 272 ARNMTTLS 295
A + TL+
Sbjct: 255 ASDALTLT 262
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 372 FPDCPHAAPLIYLSIYNIPVPLVVYEHSLVQQI-P*QIYPTGP 497
FP P + PL++ + P P V HS VQQ P I+PT P
Sbjct: 126 FPPAP-SVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 372 FPDCPHAAPLIYLSIYNIPVPLVVYEHSLVQQI-P*QIYPTGP 497
FP P + PL++ + P P V HS VQQ P I+PT P
Sbjct: 126 FPPAP-SVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 387 VDNLENKD-YLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFED 211
V +LENKD YLLV + + N+ S K+K +++ + N S +EK E
Sbjct: 279 VTSLENKDDYLLVTVEFQKRKNILFSELKKKNEEIKMLQESFNVYQKDSIEKVMEKFLEL 338
Query: 210 QRNN 199
Q N
Sbjct: 339 QHQN 342
>Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical
protein F34H10.4 protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 94 DHSLHFIITSFIHILHETHYGILWIFLVSFGRFQAVITLVFKFFFNFSHMRPCCVWIRFC 273
D + + S + L HY ++ ++S FQ V +VF F+ S+ C + F
Sbjct: 331 DFESYLKVRSVVQYLVSKHYILM---ILSSLNFQYVTPIVFYNIFSVSNSIQLCSSVFFL 387
Query: 274 KEYDY 288
K Y Y
Sbjct: 388 KVYSY 392
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = -2
Query: 213 DQRNNRLKPAETDKK----DPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKTDIM 46
D R N LK + K DP+ + ++ N YE GD + + K K D++
Sbjct: 22 DARGNSLKAQQIAGKERNLDPEADDLEVVVNFYEAGDGTFQLQLPKLTAVKPVDKVNDVL 81
Query: 45 D 43
D
Sbjct: 82 D 82
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 198 RLKPAETDKKDPQDSIMSLMKNMYETGDDEMKR 100
+LK AE DKK MSL+K + ++ +E KR
Sbjct: 371 KLKSAEEDKKLAVKKAMSLVKELQKSLKEERKR 403
>AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical
protein Y62H9A.2 protein.
Length = 217
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 243 HMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYET 121
H T+I + +++ LK ETD D Q S M ET
Sbjct: 155 HKTKILENMLEEKEKELKTRETDAHDLQKSFQFSFTEMAET 195
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = -2
Query: 378 LENKDYLLVIN--KLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQR 205
L+NK+ +L + KL++ N+ + + +V + +KSN TTWS K
Sbjct: 748 LKNKEQILKLKFMKLIKDQNILSLRIRNRFLRVAV--SKSNSKTTWSIAVSRISKRRPSI 805
Query: 204 NNRLKPAETDKKDPQDSIMSLMKNMYE 124
+ ++PA ++ ++ + L++ E
Sbjct: 806 LDEVEPAVLVEEPVEELVAELVEEAPE 832
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,266,330
Number of Sequences: 27780
Number of extensions: 311527
Number of successful extensions: 1269
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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