BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P03
(617 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2749|AAF57651.3| 766|Drosophila melanogaster CG18604-P... 30 2.9
AE013599-763|AAF59006.1| 573|Drosophila melanogaster CG8172-PA ... 29 3.8
>AE013599-2749|AAF57651.3| 766|Drosophila melanogaster CG18604-PA
protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 614 SPYASNSYGGS---NPYAPSTGGSGGKSPLDSI 525
SP S S+ GS NPY P G +GG SPL I
Sbjct: 306 SPVFSTSFSGSCSPNPYLP--GAAGGSSPLHQI 336
>AE013599-763|AAF59006.1| 573|Drosophila melanogaster CG8172-PA
protein.
Length = 573
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 593 YGGSNPYAPSTGGSGGKSPLDSIFNTLTNY 504
Y GSNPY P + G P S ++L ++
Sbjct: 177 YSGSNPYKPGSSAGGSSRPSSSSSSSLNSW 206
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,584,874
Number of Sequences: 53049
Number of extensions: 379911
Number of successful extensions: 1673
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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