Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_P02
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 292 1e-79
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 292 1e-79
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 292 1e-79
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 292 1e-79
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 292 1e-79
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 292 1e-79
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 291 2e-79
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 291 2e-79
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 291 2e-79
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 285 2e-77
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 278 2e-75
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 151 4e-37
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 132 3e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 4e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 4.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 292 bits (717), Expect = 1e-79
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 292 bits (717), Expect = 1e-79
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 292 bits (717), Expect = 1e-79
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 292 bits (717), Expect = 1e-79
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 189 SSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK 248
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 249 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 308
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 309 FQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 292 bits (717), Expect = 1e-79
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 219 SSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK 278
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 279 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 338
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 339 FQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 292 bits (717), Expect = 1e-79
Identities = 134/144 (93%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 291 bits (715), Expect = 2e-79
Identities = 133/144 (92%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 291 bits (715), Expect = 2e-79
Identities = 133/144 (92%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 291 bits (715), Expect = 2e-79
Identities = 133/144 (92%), Positives = 141/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 285 bits (700), Expect = 2e-77
Identities = 132/144 (91%), Positives = 140/144 (97%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRK
Sbjct: 233 SSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRK 292
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 278 bits (682), Expect = 2e-75
Identities = 127/144 (88%), Positives = 136/144 (94%)
Frame = -3
Query: 697 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 518
+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRK
Sbjct: 232 SSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRK 291
Query: 517 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 338
DLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 337 FQQMWISKEEYDESGPGIVHRKCF 266
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 151 bits (367), Expect = 4e-37
Identities = 69/143 (48%), Positives = 96/143 (67%)
Frame = -3
Query: 694 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 515
+ S++ SY LPD I I N FR PE LF+P +G E G+ V SIMKCDVD+R+
Sbjct: 232 NNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQT 291
Query: 514 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 335
LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 334 QQMWISKEEYDESGPGIVHRKCF 266
++MW+ K+EY++ G +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 132 bits (318), Expect = 3e-31
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 13/147 (8%)
Frame = -3
Query: 694 STSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 515
+T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D
Sbjct: 237 TTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLD 296
Query: 514 LYANTVMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWI 368
Y + V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++
Sbjct: 297 FYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFL 356
Query: 367 GGSILASL--STFQQMWISKEEYDESG 293
GG++LA+L Q W+SK+EY+E G
Sbjct: 357 GGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = -3
Query: 673 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 509
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 508 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 338
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 337 FQQMWISKEEYDESGPGIVHRKC 269
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 100 bits (239), Expect = 1e-21
Identities = 40/112 (35%), Positives = 75/112 (66%)
Frame = -3
Query: 643 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 464
I N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 463 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 308
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Frame = -3
Query: 649 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 473
+ +G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 472 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 341
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 340 TFQQMWISKEEYDESGPGI 284
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -3
Query: 649 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 470
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 469 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 299
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 298 SGPGI 284
G +
Sbjct: 379 RGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -3
Query: 649 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 470
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 469 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 299
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 298 SGPGI 284
G +
Sbjct: 379 RGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -3
Query: 559 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 395
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 394 PERK----YSVWIGGSILASL-STFQQMWISKEEY 305
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 572 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 429
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 473 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 375
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -2
Query: 548 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 369
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 368 RWIHPG 351
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,473,148
Number of Sequences: 27780
Number of extensions: 293835
Number of successful extensions: 940
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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