Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O22
         (639 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces...    30   0.32 
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom...    28   0.99 
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|...    28   0.99 
SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma...    27   3.0  
SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydro...    26   5.3  
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po...    25   9.2  

>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 475

 Score = 29.9 bits (64), Expect = 0.32
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 267 VICSQSIWGRCCYETNAKNFGTSPKHENQTYTK 169
           V+C   +  RC Y TN KN  T P +    ++K
Sbjct: 2   VVCKYFLQNRCRYGTNCKNQHTVPSNGQNAFSK 34


>SPCC1795.04c |||20S proteasome component alpha
           7|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 253

 Score = 28.3 bits (60), Expect = 0.99
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -2

Query: 521 RIWNPVSLFSCETSVR----FPDVLGYERQGKNFYMLQLDAKIYSGGRTMSAG 375
           R+ N V LF+C +SVR       V  Y+ +G + YM++ +  +Y G    +AG
Sbjct: 114 RLGNYVQLFTCYSSVRPFGVMSFVATYDSEGPHLYMVEPNG-VYWGYNGAAAG 165


>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 503

 Score = 28.3 bits (60), Expect = 0.99
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 345 FPPRKINVFSASGHSTASTIDFGVQLQHIKILSLTLISQHIRKAHASLTAKQ 500
           FPP  INV S  G    + I   + +  +     T + + + +A AS   K+
Sbjct: 215 FPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMVMRAAASSNLKK 266


>SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 387

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 357 KINVFSASGHSTASTIDFGVQLQHIKILSLTLISQH 464
           KIN+ SA  H+TA  + +   + H K    TL S H
Sbjct: 249 KINLLSALKHATALPVIYLSAIIHAKQTKFTLTSGH 284


>SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydroxy-
           6-
           hydroxymethyldihydropteridinediphosphokinase/dihydroneop
           terinaldolase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 25.8 bits (54), Expect = 5.3
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = -3

Query: 328 EYAEQLMRLVVQAILVTTPVGYLFTKHLGPVLLRDKRKEFRNESEA*KPNIYK 170
           EY EQ   L ++A++V       FTK+L  + ++ ++      + A    IY+
Sbjct: 178 EYVEQSAFLTIEALVVNLSKYLCFTKNLDDISIKAEKPSAITFANASAVQIYR 230


>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 581

 Score = 25.0 bits (52), Expect = 9.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 295 QAILVTTPVGYLFTKHLGPVLLRDKRKEFRN 203
           QAI  TT  GY F K+ G  +L     +FR+
Sbjct: 198 QAIAYTTDGGYTFKKYSGNPVLDINSLQFRD 228


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,126,256
Number of Sequences: 5004
Number of extensions: 35853
Number of successful extensions: 100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)