Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O22
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical pr...    32   0.30 
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81530-2|CAB04306.1|  359|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AC024791-38|AAY55888.1|  246|Caenorhabditis elegans Hypothetical...    28   6.5  

>Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical
           protein F57G8.5 protein.
          Length = 498

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 19/74 (25%), Positives = 37/74 (50%)
 Frame = -3

Query: 451 SVKERIFICCSWTPKSIVEAVLCPLALNTLILRGGKNEQEMEYAEQLMRLVVQAILVTTP 272
           +VKE+  I  S  P++  +A L P    TL++       ++  AE +M+  + ++L+T P
Sbjct: 389 NVKEKAVIALSLLPRATFQADLAP----TLVVMATPFPDKLPDAELVMKAAILSVLITAP 444

Query: 271 VGYLFTKHLGPVLL 230
           +  +    +G   L
Sbjct: 445 IFDILLNLIGSKFL 458


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 388 LCPLALNTLILRGGKNEQEMEYAEQLMRLVVQAILVTTPV 269
           L  L     +L GGK + + EYA Q ++     ILV T V
Sbjct: 593 LTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDV 632


>Z81530-2|CAB04306.1|  359|Caenorhabditis elegans Hypothetical
           protein F36D1.2 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 346 KNEQEMEYAEQLMRLVVQAILVTTPVGYLFTKHLGPVLLRDKRKEFR 206
           KN+ +  +   +MR      ++ TPVG L  +    V ++D  KE R
Sbjct: 100 KNKFDPIFISAIMRYHYMFFVLATPVGILVERIFATVFVKDYEKESR 146


>AC024791-38|AAY55888.1|  246|Caenorhabditis elegans Hypothetical
           protein Y47G6A.32 protein.
          Length = 246

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -3

Query: 448 VKERIFICCSWTPKSIVEAVLCPLALNTLILRGGKNEQEM 329
           +K+ + +CCS   K+ +  V+CP+   + I+    N Q++
Sbjct: 54  MKQCLDVCCSIPTKASLPRVVCPIRTTSRIVPCAGNAQQL 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,845,384
Number of Sequences: 27780
Number of extensions: 206074
Number of successful extensions: 502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)