Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O22
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.4  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   5.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 387  STASTIDFGVQLQHIKILSLTLISQHIRKAHASLTAKQTNR 509
            ST+S+I    +  H    SLT  + H R AH +L   Q +R
Sbjct: 1415 STSSSILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLSR 1455


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 387  STASTIDFGVQLQHIKILSLTLISQHIRKAHASLTAKQTNR 509
            ST+S+I    +  H    SLT  + H R AH +L   Q +R
Sbjct: 1411 STSSSILLHWKSGHNGGASLTGYTLHYRTAHGNLDELQLSR 1451


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 118 KLTFSSYSVFXFTNXALFCI 177
           +  F +Y +F F N  ++C+
Sbjct: 142 RCNFKAYCLFSFLNTIVYCV 161


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 629 CLDRLSRFVGSFGACRVRIHWXIL*NKTYIN*HNTKR 519
           CLD ++  + +F     R +  +   +TY + HNT++
Sbjct: 358 CLDSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQ 394


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 393 ASTIDFGVQLQHIKI 437
           A+ IDFG+ +QH  +
Sbjct: 59  ATKIDFGLSIQHYNV 73


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 506 QDSKSF*YCVS*CMFYFKVCXSVCEHGRLQSCPQNAINGRGR 631
           QDS    + +     Y K C  + +   ++  P + I+GR R
Sbjct: 27  QDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDR 68


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 506 QDSKSF*YCVS*CMFYFKVCXSVCEHGRLQSCPQNAINGRGR 631
           QDS    + +     Y K C  + +   ++  P + I+GR R
Sbjct: 27  QDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDR 68


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 506 QDSKSF*YCVS*CMFYFKVCXSVCEHGRLQSCPQNAINGRGR 631
           QDS    + +     Y K C  + +   ++  P + I+GR R
Sbjct: 27  QDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDR 68


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -1

Query: 243 GRCCYETNAKNFGTSPKHENQTY 175
           G  CY    KN G +  H    Y
Sbjct: 139 GGSCYWPRGKNLGGTTLHHGMAY 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,587
Number of Sequences: 438
Number of extensions: 2502
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)