Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O20
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.       161   4e-40
AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock pr...   161   4e-40
AJ270981-1|CAB65903.1|  223|Caenorhabditis elegans heat shock pr...    56   2e-08
U80031-2|AAB37612.1|  468|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AL117205-5|CAB55163.1|  456|Caenorhabditis elegans Hypothetical ...    29   3.0  
U10401-10|AAA19062.2|  476|Caenorhabditis elegans Hypothetical p...    29   4.0  
U41548-2|AAA83204.1|  399|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.
          Length = 568

 Score =  161 bits (391), Expect = 4e-40
 Identities = 82/132 (62%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = -3

Query: 673 DALXATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQATGVEIVKKALRMPCMTIAKN 494
           DAL ATRAAVEEGIVPGGG ALLR +  L+  K  N DQ  GV IVKKAL  P  TI KN
Sbjct: 414 DALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQQIGVNIVKKALTQPIATIVKN 473

Query: 493 AGIDGSVVVAKVE-DLGDEFGYDALNNEYVNMIEKGIIDPTKVVRTALTDASGVASLLTT 317
           AG++ S ++ +V  +    +GYDALN ++V+M E GIIDPTKVVRTAL DASGVASLL T
Sbjct: 474 AGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVASLLAT 533

Query: 316 AEAVICEIPQEK 281
            E V+ EIP+E+
Sbjct: 534 TECVVTEIPKEE 545


>AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock
           protein protein 60 protein.
          Length = 568

 Score =  161 bits (391), Expect = 4e-40
 Identities = 82/132 (62%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = -3

Query: 673 DALXATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQATGVEIVKKALRMPCMTIAKN 494
           DAL ATRAAVEEGIVPGGG ALLR +  L+  K  N DQ  GV IVKKAL  P  TI KN
Sbjct: 414 DALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQQIGVNIVKKALTQPIATIVKN 473

Query: 493 AGIDGSVVVAKVE-DLGDEFGYDALNNEYVNMIEKGIIDPTKVVRTALTDASGVASLLTT 317
           AG++ S ++ +V  +    +GYDALN ++V+M E GIIDPTKVVRTAL DASGVASLL T
Sbjct: 474 AGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVASLLAT 533

Query: 316 AEAVICEIPQEK 281
            E V+ EIP+E+
Sbjct: 534 TECVVTEIPKEE 545


>AJ270981-1|CAB65903.1|  223|Caenorhabditis elegans heat shock
           protein 60 protein.
          Length = 223

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = -3

Query: 673 DALXATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQ 557
           DAL ATRAAVEEGIVPGGG ALLR +  L+  K  N DQ
Sbjct: 183 DALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQ 221


>U80031-2|AAB37612.1|  468|Caenorhabditis elegans Hypothetical
           protein B0554.5 protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 21/89 (23%), Positives = 40/89 (44%)
 Frame = +2

Query: 371 LCGVNDALFNHVYIFIVEGIIPKFISKILHLSNNNRTINACIFCYCHAWHPQSFLYNLYT 550
           +CG+ D   N V   I   ++PK  ++   +S   +   +CI  +     P + LY +YT
Sbjct: 369 ICGIGDCCINSVRSVICALVMPKRRAQAFSVSKIYQAFGSCILFFL---SPITPLY-VYT 424

Query: 551 SGLITVDCFELF*YWNTSQECRTTSRYNT 637
            GL  +       +++ ++  + T R  T
Sbjct: 425 IGLPILAIIATILFFSIAKRTQITERKMT 453


>AL117205-5|CAB55163.1|  456|Caenorhabditis elegans Hypothetical
           protein Y116A8A.6 protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/56 (33%), Positives = 35/56 (62%)
 Frame = +3

Query: 318 VVSSDATPLASVRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSSTLATTTEPS 485
           +++++ TP+ + R+  +T + + +  +IM      +AS  ++SP SS  ATTTEPS
Sbjct: 288 ILTTEPTPVTTERSTVSTTISTSLETTIM------QAS--SASPISSKPATTTEPS 335


>U10401-10|AAA19062.2|  476|Caenorhabditis elegans Hypothetical
           protein T20B12.9 protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -3

Query: 643 EEGIVPGGGSALLRCIPVLEQLKTVNSDQATG-VEIVKKALRMPCMTIAKNAGIDGSVVV 467
           +EG   G G  L + IPVL QLK   +D  +G    +  A++ P   +      D S +V
Sbjct: 341 DEGGGGGVGGLLRKRIPVLAQLKAAATDSNSGAATAMTTAIQPPNTNLNSITNSDNSKLV 400

Query: 466 A 464
           A
Sbjct: 401 A 401


>U41548-2|AAA83204.1|  399|Caenorhabditis elegans Hypothetical
           protein M02F4.1 protein.
          Length = 399

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 344 GIGQGCPHHLCGVNDALFNHVYIFIVEGI-IPKFISKILHLSNNNRTI 484
           GI QG PH LC  ND   +H +  I   I + + I KI +  N   +I
Sbjct: 343 GIQQGSPHVLCAKND---DHCFKKIQNTILVTEAIGKIFNRENTAHSI 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,456,352
Number of Sequences: 27780
Number of extensions: 287984
Number of successful extensions: 999
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)