Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O10
         (560 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281...    29   1.9  
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592...    29   1.9  
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477...    28   5.9  
05_04_0436 + 21226656-21226695,21226819-21226934,21227059-212272...    27   7.7  

>05_01_0360 +
           2814139-2814627,2815203-2815334,2815480-2815583,
           2816180-2816292,2818409-2818506,2818636-2818815,
           2818893-2819114,2819270-2819404,2819489-2819771,
           2819858-2819931,2820164-2820384,2820463-2820550,
           2820651-2820744,2820827-2821015,2821369-2821400,
           2821542-2821621,2821718-2821807,2821911-2821980,
           2822240-2822285,2822370-2822428,2822588-2822753,
           2822929-2823107,2823186-2823392,2823529-2823633,
           2823701-2823703
          Length = 1152

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +2

Query: 284 HKFKNRN-LIHKTFYMYTTNYKIL 352
           H+ KN N L+ KT  +Y TNY++L
Sbjct: 416 HRIKNENSLLSKTMRIYNTNYRLL 439


>01_04_0010 -
           15058175-15058195,15058320-15058430,15059031-15059246,
           15059327-15059505,15059655-15059820,15059914-15059972,
           15060065-15060107,15060285-15060354,15060458-15060547,
           15060621-15060742,15060777-15060808,15060876-15061064,
           15061148-15061241,15061325-15061412,15061498-15061718,
           15061924-15061997,15062081-15062363,15062455-15062589,
           15062721-15062942,15063029-15063208,15063305-15063402,
           15063522-15063634,15064156-15064259,15064400-15064522,
           15064857-15065192
          Length = 1122

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +2

Query: 284 HKFKNRN-LIHKTFYMYTTNYKIL 352
           H+ KN N L+ KT  +Y TNY++L
Sbjct: 362 HRIKNENSLLSKTMRIYNTNYRLL 385


>07_03_1291 +
           25545749-25546262,25546989-25547669,25547693-25547751,
           25549152-25549242,25549330-25549743,25550191-25550243,
           25550947-25551177,25551492-25551708,25551790-25551890,
           25552446-25552532,25553536-25553676,25553839-25553961,
           25554070-25554522,25554931-25555308,25555410-25556060,
           25556264-25556368,25556482-25556707,25557204-25557241
          Length = 1520

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 254 FTCKFNVSFWHKFKNRNLIHKTFYMY 331
           FTC F +SFW   + + +I +T +++
Sbjct: 303 FTCPFAISFWQTIRVQPIITETKFLF 328


>05_04_0436 +
           21226656-21226695,21226819-21226934,21227059-21227210,
           21227309-21227394,21227999-21228126,21228267-21228317,
           21228574-21228660,21229418-21229487,21230334-21230470,
           21230855-21230932,21231912-21231998
          Length = 343

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 457 RNLVQADLLNFALYTWHTAKRHFLXNN 537
           R+ V A +  F    W+ AK+H+L NN
Sbjct: 139 RSQVVASIPGFFFCIWYAAKKHWLANN 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,344,657
Number of Sequences: 37544
Number of extensions: 167996
Number of successful extensions: 294
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)