Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O09
         (599 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672...    28   5.0  
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175     27   8.7  

>02_05_0969 + 33165396-33165935,33166352-33166883,33166988-33167242,
            33167515-33167606,33167745-33167942,33168049-33168240,
            33168341-33168562,33168858-33169024,33169117-33169210,
            33169308-33169364,33169459-33169587,33169681-33169752,
            33170180-33170293,33170419-33170580,33170666-33170794,
            33171057-33171158,33171266-33171342,33171470-33171592,
            33171666-33172227
          Length = 1272

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -1

Query: 431  KGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKR 276
            + + R   +++  A T G DY             K DPYAY PL R  LN+R
Sbjct: 1176 QSVKRRKTTSSGWAYT-GHDYTSKKASGDLKKKDKMDPYAYWPLDRKLLNRR 1226


>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
          Length = 294

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 376 PPSVDATDAAESKFLCIPFPPVLYLEP 456
           PP  DAT   E    C PF P+ ++EP
Sbjct: 209 PPPSDAT-GGEVSIPCFPFSPLPFIEP 234


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,393,240
Number of Sequences: 37544
Number of extensions: 155122
Number of successful extensions: 386
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)