Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_O09
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012745-1|AAH12745.1| 1297|Homo sapiens ribosomal RNA processin... 54 3e-07
BC002621-1|AAH02621.3| 203|Homo sapiens RRP12 protein protein. 54 3e-07
AL355490-8|CAI40776.1| 1197|Homo sapiens KIAA0690 protein. 54 3e-07
AL355490-7|CAI40777.1| 1297|Homo sapiens KIAA0690 protein. 54 3e-07
AB014590-1|BAA31665.1| 1214|Homo sapiens KIAA0690 protein protein. 54 3e-07
BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein. 29 9.4
AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein. 29 9.4
AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein. 29 9.4
AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envel... 29 9.4
AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein. 29 9.4
>BC012745-1|AAH12745.1| 1297|Homo sapiens ribosomal RNA processing 12
homolog (S. cerevisiae) protein.
Length = 1297
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -1
Query: 449 KYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKK 270
+Y+ GG GIHR + A G +Y+ + DPYAY+PL+R+ LN+RKK
Sbjct: 1211 QYQAGGSGIHRPVAKKAMP----GAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKK 1266
Query: 269 SVNSKQFKGIV 237
QFKG+V
Sbjct: 1267 MKLQGQFKGLV 1277
>BC002621-1|AAH02621.3| 203|Homo sapiens RRP12 protein protein.
Length = 203
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -1
Query: 449 KYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKK 270
+Y+ GG GIHR + A G +Y+ + DPYAY+PL+R+ LN+RKK
Sbjct: 117 QYQAGGSGIHRPVAKKAMP----GAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKK 172
Query: 269 SVNSKQFKGIV 237
QFKG+V
Sbjct: 173 MKLQGQFKGLV 183
>AL355490-8|CAI40776.1| 1197|Homo sapiens KIAA0690 protein.
Length = 1197
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -1
Query: 449 KYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKK 270
+Y+ GG GIHR + A G +Y+ + DPYAY+PL+R+ LN+RKK
Sbjct: 1111 QYQAGGSGIHRPVAKKAMP----GAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKK 1166
Query: 269 SVNSKQFKGIV 237
QFKG+V
Sbjct: 1167 MKLQGQFKGLV 1177
>AL355490-7|CAI40777.1| 1297|Homo sapiens KIAA0690 protein.
Length = 1297
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -1
Query: 449 KYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKK 270
+Y+ GG GIHR + A G +Y+ + DPYAY+PL+R+ LN+RKK
Sbjct: 1211 QYQAGGSGIHRPVAKKAMP----GAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKK 1266
Query: 269 SVNSKQFKGIV 237
QFKG+V
Sbjct: 1267 MKLQGQFKGLV 1277
>AB014590-1|BAA31665.1| 1214|Homo sapiens KIAA0690 protein protein.
Length = 1214
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = -1
Query: 449 KYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKK 270
+Y+ GG GIHR + A G +Y+ + DPYAY+PL+R+ LN+RKK
Sbjct: 1128 QYQAGGSGIHRPVAKKAMP----GAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKK 1183
Query: 269 SVNSKQFKGIV 237
QFKG+V
Sbjct: 1184 MKLQGQFKGLV 1194
>BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 372 LQTEESQGRYQE-EGQARSLRLPTPVQDKSQ*KEKICQQQTVQ 247
LQ EE Q R Q EG+ +LR +K++ KEK+ ++VQ
Sbjct: 1464 LQLEEEQHRRQLLEGELETLRRKLAALEKAEVKEKVVLSESVQ 1506
>AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 372 LQTEESQGRYQE-EGQARSLRLPTPVQDKSQ*KEKICQQQTVQ 247
LQ EE Q R Q EG+ +LR +K++ KEK+ ++VQ
Sbjct: 1464 LQLEEEQHRRQLLEGELETLRRKLAALEKAEVKEKVVLSESVQ 1506
>AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 372 LQTEESQGRYQE-EGQARSLRLPTPVQDKSQ*KEKICQQQTVQ 247
LQ EE Q R Q EG+ +LR +K++ KEK+ ++VQ
Sbjct: 1464 LQLEEEQHRRQLLEGELETLRRKLAALEKAEVKEKVVLSESVQ 1506
>AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envelope
precursor protein.
Length = 1756
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 372 LQTEESQGRYQE-EGQARSLRLPTPVQDKSQ*KEKICQQQTVQ 247
LQ EE Q R Q EG+ +LR +K++ KEK+ ++VQ
Sbjct: 1464 LQLEEEQHRRQLLEGELETLRRKLAALEKAEVKEKVVLSESVQ 1506
>AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein.
Length = 1426
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 372 LQTEESQGRYQE-EGQARSLRLPTPVQDKSQ*KEKICQQQTVQ 247
LQ EE Q R Q EG+ +LR +K++ KEK+ ++VQ
Sbjct: 1134 LQLEEEQHRRQLLEGELETLRRKLAALEKAEVKEKVVLSESVQ 1176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,107,067
Number of Sequences: 237096
Number of extensions: 856190
Number of successful extensions: 1830
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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