Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O09
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ...    32   0.27 

>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
            protein Y46E12BL.2 protein.
          Length = 1334

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = -1

Query: 518  DDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXX 339
            D+ILS      +   A T    +    GGKGI+R+    + V S++G   +         
Sbjct: 1232 DEILSDDDDDDDEKDAKTFVSRAAPSYGGKGIYRDTSGKSQVGSSVGAKRQQKQKPNKPK 1291

Query: 338  XXXKH-DPYAYLPL-SRTNLNKRKKSVNSKQFKG 243
               K   PYAY+PL ++T     ++ + +K+  G
Sbjct: 1292 QQQKSVQPYAYVPLRNKTAKQDVRQILKAKRKSG 1325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,171,749
Number of Sequences: 27780
Number of extensions: 140099
Number of successful extensions: 378
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)