Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O09
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.3  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   7.0  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 539 PGTKRRYDDILS 504
           P TKR YDD+LS
Sbjct: 32  PDTKRLYDDLLS 43


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -3

Query: 369  QTEESQGRYQEEGQARSLRLPTPVQDKSQ*KEKICQQQ 256
            Q ++ Q + Q++ Q    + P P Q + Q +++  QQQ
Sbjct: 1509 QQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 563 GKPSKLLKPGTKRRYDDIL 507
           GKPS++ K G  RR+ ++L
Sbjct: 542 GKPSRISKQGLFRRFYNLL 560


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 351 GRYQEEGQARSLRLPTPVQDKSQ*KEKICQQQTVQRDSE 235
           G  QE+ Q +  +  T  Q + Q   K  QQQ  Q+D +
Sbjct: 229 GYIQEQNQQQQQQPLTQQQYQQQIVGKYLQQQAGQQDQQ 267


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = -1

Query: 530 KRRYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVASTLGGDY 369
           ++R  D   + SG  +  RA     G + K    GI+ +  S         G Y
Sbjct: 236 EKRSTDFQDVESGSESFKRARMGFHGMRGKRDAAGIYGSNSSTVGTIFGYQGTY 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,315
Number of Sequences: 438
Number of extensions: 1759
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)