Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_O06
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-3|AAK95874.1| 734|Caenorhabditis elegans Hypothetical pr... 157 6e-39
Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical p... 29 3.6
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 29 4.8
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 28 6.3
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 28 6.3
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41010-2|AAF98588.1| 585|Caenorhabditis elegans Trehalase prote... 28 8.4
AJ512334-1|CAD54508.2| 585|Caenorhabditis elegans trehalase pro... 28 8.4
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 8.4
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 8.4
>U10402-3|AAK95874.1| 734|Caenorhabditis elegans Hypothetical protein
C34E10.5 protein.
Length = 734
Score = 157 bits (382), Expect = 6e-39
Identities = 107/280 (38%), Positives = 142/280 (50%), Gaps = 38/280 (13%)
Frame = -3
Query: 763 RDVVVIXGDMRQINLSPK------ADIIVXELLGSWGDNELSPECLDGASNLLKPGGISI 602
R V +I DMR + K DIIV ELLGS+GDNELSPECLDG + LKP ISI
Sbjct: 469 RRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 528
Query: 601 PSSYRSYVAPITSPRLWAAAKIAT------------SGIPQQKD--------------KN 500
P Y SYV PI S + K + G P+ + N
Sbjct: 529 PQKYTSYVKPIMSTHIHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNN 588
Query: 499 LETLWVVYMQNKHDIAET-KLVFTFNHPSKAVKDEEGCDKSDYRGLPLTNNRRQATLTWD 323
++ ++VVY+ +AET K VFTF HP+ ++N R ++ +
Sbjct: 589 MDQIYVVYLSKYIPLAETTKPVFTFEHPN----------------FMNSSNERSDSIEFV 632
Query: 322 VQQDNIMHGFGGYFDCTLYGNEMISIVPGTHSPGMISWFPVFIPIKTPMRVQKGDKITAT 143
+ ++ + GF GYFD LY M+SI P TH+PGM+SWFP IP++ +RV +GD+I+
Sbjct: 633 MDRNADLMGFAGYFDLQLYKTVMLSIEPSTHTPGMVSWFPAVIPLRDQLRVGEGDRISLK 692
Query: 142 FWRCVDSRRVWYEWVVEVGNR-----STPLHNANGRSSEM 38
R VD+ VWYEW VE STP+ N NG S M
Sbjct: 693 IDRKVDNTGVWYEWHVEKKKTNGESVSTPIQNPNGESYYM 732
>Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 29.1 bits (62), Expect = 3.6
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 152 YFITLLYSHWCLNWNKDWKPGDHSWAMCTRNNA 250
+F+++ ++ +C++ K W G + W C N +
Sbjct: 10 FFLSIGWARYCVHNEKSWCQGHNIWGWCFHNKS 42
>Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 29.1 bits (62), Expect = 3.6
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 152 YFITLLYSHWCLNWNKDWKPGDHSWAMCTRNNA 250
+F+++ ++ +C++ K W G + W C N +
Sbjct: 10 FFLSIGWARYCVHNEKSWCQGHNIWGWCFHNKS 42
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 483 LFTCRINMILQKQSSSSRLTIHPKP 409
+ T R+NM + KQ SSS+ I+P+P
Sbjct: 598 IVTKRVNMRILKQGSSSKSAINPQP 622
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 84 LPTS--TTHSYHTRRESTHLQNVAVILSPFCTRIGVLIGIKTGNQEIIPGLC-VPGTMLI 254
+PTS + HS H STH +++V T ++ + + P LC +P + +
Sbjct: 697 IPTSPPSCHSSHVTSNSTHSTHISVSFPNTVTSASSILSNSSSPHQPTPSLCSLPESSSL 756
Query: 255 ISLP 266
S+P
Sbjct: 757 HSIP 760
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 84 LPTS--TTHSYHTRRESTHLQNVAVILSPFCTRIGVLIGIKTGNQEIIPGLC-VPGTMLI 254
+PTS + HS H STH +++V T ++ + + P LC +P + +
Sbjct: 697 IPTSPPSCHSSHVTSNSTHSTHISVSFPNTVTSASSILSNSSSPHQPTPSLCSLPESSSL 756
Query: 255 ISLP 266
S+P
Sbjct: 757 HSIP 760
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 486 GLFTCRINMILQKQSSSSRLTIHPKP 409
G+F C+++ + + S S LT+H KP
Sbjct: 1245 GVFVCQVSNLAGEDSLSYTLTVHEKP 1270
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 486 GLFTCRINMILQKQSSSSRLTIHPKP 409
G+F C+++ + + S S LT+H KP
Sbjct: 1245 GVFVCQVSNLAGEDSLSYTLTVHEKP 1270
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 486 GLFTCRINMILQKQSSSSRLTIHPKP 409
G+F C+++ + + S S LT+H KP
Sbjct: 1245 GVFVCQVSNLAGEDSLSYTLTVHEKP 1270
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 486 GLFTCRINMILQKQSSSSRLTIHPKP 409
G+F C+++ + + S S LT+H KP
Sbjct: 1245 GVFVCQVSNLAGEDSLSYTLTVHEKP 1270
>U41010-2|AAF98588.1| 585|Caenorhabditis elegans Trehalase protein
2 protein.
Length = 585
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 160 DKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNAN 56
D I W + W+++ VE GN +T H+ N
Sbjct: 357 DTIRQVLWN--EEHNCWFDFDVEEGNHATSFHDTN 389
>AJ512334-1|CAD54508.2| 585|Caenorhabditis elegans trehalase
protein.
Length = 585
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 160 DKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNAN 56
D I W + W+++ VE GN +T H+ N
Sbjct: 357 DTIRQVLWN--EEHNCWFDFDVEEGNHATSFHDTN 389
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 486 GLFTCRINMILQKQSSSSRLTIHPKP 409
G+F C+++ + + S S LT+H KP
Sbjct: 1245 GVFVCQVSNLAGEDSLSYTLTVHEKP 1270
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.9 bits (59), Expect = 8.4
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 218 HSWAMCTRNNADHFITIK 271
H W +C +N DH++T++
Sbjct: 2095 HPWPVCQFDNGDHYVTVQ 2112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,542,069
Number of Sequences: 27780
Number of extensions: 455005
Number of successful extensions: 1153
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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