Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O04
         (587 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116...    37   0.014
08_02_0163 + 13470178-13470335,13470635-13470656,13470885-134710...    35   0.055

>09_01_0079 -
           1159963-1160211,1160303-1160509,1160631-1160801,
           1161732-1161869,1162184-1162273,1162354-1162431,
           1162510-1163166,1163245-1163363,1164305-1164584
          Length = 662

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 16/29 (55%), Positives = 24/29 (82%)
 Frame = -2

Query: 580 IKIDNSELLHMLEHAESLKAKVDEAVAVL 494
           +++D +E+LH+LE  E+LKAKV EA+ VL
Sbjct: 606 LEMDQTEVLHLLESPEALKAKVAEAMEVL 634


>08_02_0163 +
           13470178-13470335,13470635-13470656,13470885-13471055,
           13471157-13471363,13471458-13471700
          Length = 266

 Score = 34.7 bits (76), Expect = 0.055
 Identities = 14/29 (48%), Positives = 24/29 (82%)
 Frame = -2

Query: 580 IKIDNSELLHMLEHAESLKAKVDEAVAVL 494
           +++D +E+LH++E  ++LKAKV EA+ VL
Sbjct: 212 LEMDQTEVLHLIESPDALKAKVAEAMEVL 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,633,182
Number of Sequences: 37544
Number of extensions: 126390
Number of successful extensions: 218
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)