Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O03
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   311   4e-87
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    75   4e-16
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   9.6  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  311 bits (763), Expect = 4e-87
 Identities = 143/174 (82%), Positives = 156/174 (89%)
 Frame = -3

Query: 612 DDHFLFKEGDRFLQAANACRXWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQV 433
           DDHFLFKEGDRFLQAANACR WPTGRGIYHN++KTFLVWCNEEDHLRIISMQMGGDL QV
Sbjct: 182 DDHFLFKEGDRFLQAANACRFWPTGRGIYHNDDKTFLVWCNEEDHLRIISMQMGGDLGQV 241

Query: 432 YKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVAS 253
           Y+RLV AVNEIEK++ FSH+DRLGFLTFCPTNLGTTVRASVHI           LEE+A 
Sbjct: 242 YRRLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAG 301

Query: 252 KYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKSL 91
           K++LQVRGTRGEHTEAEGG+YDISNKRR+GLTEY AVKEM+DGIAELIK+EK L
Sbjct: 302 KFNLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQAVKEMHDGIAELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 75.4 bits (177), Expect = 4e-16
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -3

Query: 612 DDHFLFKEGDRFLQAANACRXWPTGRGIYHNENKT 508
           DDHFLFKEGDRFLQAANA R WPTGRGIYHN++KT
Sbjct: 166 DDHFLFKEGDRFLQAANAXRFWPTGRGIYHNDDKT 200


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 592  GGRPLPAGRQRLP 554
            GGRP+P   +R+P
Sbjct: 1361 GGRPVPERPERVP 1373


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 540 GRGIYHNENKTFLVWCNEEDHLRIISMQM 454
           GRGI + + K   V  +++ H++I    M
Sbjct: 103 GRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.138    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,569
Number of Sequences: 438
Number of extensions: 2251
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)