BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_O01
(685 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024954-1|ABE01184.1| 571|Drosophila melanogaster IP15822p pro... 32 0.64
BT003586-1|AAR88555.1| 2558|Drosophila melanogaster LD10678p pro... 32 0.64
AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE... 32 0.64
AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC... 32 0.64
AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD... 32 0.64
AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA... 32 0.64
>BT024954-1|ABE01184.1| 571|Drosophila melanogaster IP15822p
protein.
Length = 571
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 36 LDSYSSEARIYTCNINYTILDLKTNLTLNI 125
LD ++ +Y CNI T+ +L NLTLNI
Sbjct: 332 LDPQLEDSGLYKCNIKNTLGELNANLTLNI 361
>BT003586-1|AAR88555.1| 2558|Drosophila melanogaster LD10678p
protein.
Length = 2558
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 36 LDSYSSEARIYTCNINYTILDLKTNLTLNI 125
LD ++ +Y CNI T+ +L NLTLNI
Sbjct: 392 LDPQLEDSGLYKCNIKNTLGELNANLTLNI 421
>AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE,
isoform E protein.
Length = 8647
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 36 LDSYSSEARIYTCNINYTILDLKTNLTLNI 125
LD ++ +Y CNI T+ +L NLTLNI
Sbjct: 332 LDPQLEDSGLYKCNIKNTLGELNANLTLNI 361
>AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC,
isoform C protein.
Length = 8648
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 36 LDSYSSEARIYTCNINYTILDLKTNLTLNI 125
LD ++ +Y CNI T+ +L NLTLNI
Sbjct: 392 LDPQLEDSGLYKCNIKNTLGELNANLTLNI 421
>AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD,
isoform D protein.
Length = 8930
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 36 LDSYSSEARIYTCNINYTILDLKTNLTLNI 125
LD ++ +Y CNI T+ +L NLTLNI
Sbjct: 604 LDPQLEDSGLYKCNIKNTLGELNANLTLNI 633
>AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA,
isoform A protein.
Length = 8943
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 36 LDSYSSEARIYTCNINYTILDLKTNLTLNI 125
LD ++ +Y CNI T+ +L NLTLNI
Sbjct: 628 LDPQLEDSGLYKCNIKNTLGELNANLTLNI 657
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,752,597
Number of Sequences: 53049
Number of extensions: 390626
Number of successful extensions: 847
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -