Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_O01
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    31   0.77 
U00055-8|AAL06043.1|  311|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    28   7.1  
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ...    28   7.1  

>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
           protein 11 protein.
          Length = 1032

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 470 THPFIKSFFGLLNHSFVIYVVHSF 399
           TH  +  FFGL+N S +I+ +HS+
Sbjct: 536 THENLNRFFGLINESDLIFTIHSY 559


>U00055-8|AAL06043.1|  311|Caenorhabditis elegans Hypothetical
           protein R02F2.1b protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 155 RMSMSVFSSMRWHQREGNLNIAVQLNLSLIKSIDLMKSINERFH 286
           RM + +   +RW     NLN  V+  LS + +  L+ SIN R H
Sbjct: 142 RMEIKILEVLRWDAHLPNLNRFVECLLSELDAAFLLPSINFRKH 185


>Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical
           protein C47A10.7 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 494 TYCSQLFITHPFIKSFFGLLNHSFVIYVVHSFIKSVIRFL 375
           ++ +Q F++ PF+    G+L+   V   VH FI SVI +L
Sbjct: 64  SFFAQPFLSAPFVGFPMGVLHCIGVDTAVHVFIASVIAYL 103


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 21  NNDFELDSYSSEARIYTCNINYTILDLKTNLTLNII 128
           NN   LDS S+  R +TC  N   LD  TN  +N I
Sbjct: 797 NNKGILDSGSTVNRTFTCTKNSKWLDTTTNSIVNNI 832


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 21  NNDFELDSYSSEARIYTCNINYTILDLKTNLTLNII 128
           NN   LDS S+  R +TC  N   LD  TN  +N I
Sbjct: 797 NNKGILDSGSTVNRTFTCTKNSKWLDTTTNSIVNNI 832


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 21  NNDFELDSYSSEARIYTCNINYTILDLKTNLTLNII 128
           NN   LDS S+  R +TC  N   LD  TN  +N I
Sbjct: 797 NNKGILDSGSTVNRTFTCTKNSKWLDTTTNSIVNNI 832


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 21  NNDFELDSYSSEARIYTCNINYTILDLKTNLTLNII 128
           NN   LDS S+  R +TC  N   LD  TN  +N I
Sbjct: 797 NNKGILDSGSTVNRTFTCTKNSKWLDTTTNSIVNNI 832


>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
            protein D1007.15 protein.
          Length = 1184

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -1

Query: 460  SLNHSLVY*IIHSLFTSFIHLLSQSFVS*IIYEITHSLIK*FIHFLNLSFLNYIVHSF 287
            S  HSL++ +  SL  S   L+S  F   II+  + +++  F+H + + FL  +  SF
Sbjct: 920  SFRHSLLFILYASLLYSVTILMSTFFFLPIIFTHSQTILTSFLH-IPVLFLGTLFTSF 976


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,248,165
Number of Sequences: 27780
Number of extensions: 215624
Number of successful extensions: 419
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)