Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_N24
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   0.70 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   2.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   6.6  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   6.6  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 533 LKRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTRTRWSAGSA 402
           ++  ++CH    A  GA R+      R GT + W R  W A +A
Sbjct: 850 VREDARCHRRLLAAPGASRKDIRLEERQGTFQEWQRA-WDAAAA 892


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 253 YTQAGVAVPAALPAHGRAPQPQRRRVPG 170
           + QA  A+  A P  G  P PQ  R PG
Sbjct: 169 HQQAPFAMDPARPNPGMPPGPQMMRPPG 196


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 260 SRNWKPARVMTADPSSASLVMSPACSSMRTASAL 361
           SR  KP+   T  P+ ASL  S + SS  ++++L
Sbjct: 777 SRCSKPSVTSTTPPTPASLSSSSSSSSSASSTSL 810


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = +1

Query: 346 DGVGADALGLRAAHHVVQHALPALQRVRVQERHVPGLPVRLQRRRH 483
           DG G    G R  HH+ +HA   L    V       LP     + H
Sbjct: 463 DGPGGGGGGSRYEHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLH 508


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = +1

Query: 346 DGVGADALGLRAAHHVVQHALPALQRVRVQERHVPGLPVRLQRRRH 483
           DG G    G R  HH+ +HA   L    V       LP     + H
Sbjct: 439 DGPGGGGGGSRYEHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLH 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,819
Number of Sequences: 2352
Number of extensions: 8196
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)